Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00050 ATGTCACCGGAAGGCCACGTCATGTCGTCGACTCCGGGAGACTTCAGGCTCCCTTGGGACGTCTTCCTGAGCTTCAGAGGTGCGGATACTCGTGATTGCCTCGCAAAACCCCTCCACAAGGCGCTCCAATCTCGCGGCGTTCGAGTTTTCCTGGACGATGTTGGGTTGGATCGCGGGGACCAGATAGCTCCGAGTCTGCTCGAAGCCATCGATGACTCGGCCTCTTCGATCATCATCATCTCTCCTGACTACGCCTCTTCTCATTGGTGTCTGGAGGAGCTTGCCAAGATTTGCGACTGCGAAAGACTGATTCTGCCGGTGTTCTACTACGTAGGCCCCACTGATGTCCTCGAACAAACAGGTCCATTTGAAGATTCTTTCAAAATTCATGAAGCCAAGAGGAGCGAAGATGAGGTAATCAGGTGGAGGAAAGCTATGAAGAAAGTAGGTGGACTTGCTGGTTGGGTTTTCCAGAATCCCAGCCAAGAAGACCATCTAATTGGACTTTTAGTACAAAGGATTCTGAAAGAACTAATTAATACTCCGGTTGGTGTGGCTGAGTTTACCGTTGGACTCGATGCTCGCATTGAAGAACTGTTGGAATTGTTAGACATGAGATCCAACGGGATGAGGGTATTGGGATTGCATGGGATGGGTGGGATTGGTAAGACTACCCTAGCGAAGGCGTTTTTTAACAGAATCGTTGTGGATTTTGACCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGAGGGCTTAATTTCTCTAAGAAACAGAATTATAAGTGACATTTCCTCTCAAACAGTGGTTGGAAACGATATTTCTGCTTTCAGAAGAACAGTTAGTGAAAACCGTGCTCTGGTAATCCTGGATGATGTGGATGATGTGAAGCAGCTCGATACTCTAATTGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTATATTAGTCACATCAAGGGATACGCGAGCTCTGCCTGAGACTCATGTTAATGTCTTGTACGAAGTTCAAATATTGGATGACTCTGAGTCGCTAGAACTATTCTGTTACCATGCAATGCGAAGAAAGAAACCTGCAGGCGAAACTTTCTTGAAATTGTCGAAGGAAATAGTGTCTCTAACACGAAGATTGCCTTTAGCTCTGGAAGTGCTTGGTTCAATGTTGTTTCGTAAGAGAAGGGAAAAAAAGGAATGGGTTGATGCTGAGGAGAAACTGAAGGTAATTCGACCTTGGAATCTTCAGGAAGTGCTGAGGATCAGTTATGAGGGGTTAGATGAGCAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCCGATGAGGATGAAGCGAGAAGATGTTATTGATGTACTAAGAGGCTGTAGATATGGGGGAGAGATAGCAATCACAGATCTCACAGAAAAATGCTTGATCAAAATCAGAGAGGACGAAACCATTTGGATGCATGATGAAATTAGAGATATGGGACGGCAAATTGATGTGGAAGAAAACCTCGTTGAGCCGGGTATGCCTGGTCGATTGTGGGATCGATCTGAAATTCTAGCTGTTTTGAGGAATATGAAGGGATCTAGTAGTATTCGAGGGATGGTGCTAGACTTCGAGGAAAGATCTACTAAAGACAACGAACAAGCAATTTCTTGTTGCAACCTTAAATCTGGTTCCAGTTTCGTGAATGCCCTGTCATTCCTTAAACAGATTCACGGGAAATATTTTCAACGAGTTGAGAGGGACAAAGAGGTCACAGTGCTTCGAACCAAGCCCTTTGAATCCATGGTGAACTTGGTGCTGCTTCAGATCAATAATTTGAGGTTGGAAGGGAAGTTTAAATCTTTCCCTGCAGAATTGAAGTGGCTGCAATGGCAAGGATGCCCTTTAAAGTGCATGCCTTCTGATTTTTGGCCCCAAGAATTGGCTGTCCTTGATCTCGCACACAGCTATATTGAGAATTTGTGGAATCGGAAGGGATACAAGGTGCCCAAGAACCTCATGGTCATGAACCTCTCCTATTGCTATCACCTGGAGGCTCTTCCTGATTTGTCTGGCTGTAGATGTTTAGAGAAGATTGTTCTAGTGAATTGCATTAAACTAAGAAGGATTCACGACTCAGTTGGCGGTCTGAGCACACTTCGTCATTTGAATATGACTCGTTGTACTGAACTTAGTGAGCTACCCAATGATTTATCTGGGCTGAAAAATCTTGAGAGCCTGTGTCTCTCCGATTGCTGCAAGTTAAAATCGTTACCAAGGAACATAGCCAACTGGAAATCTCTAAGAAAACTTCTTGCTAATGGCACGGCTTTAGCAGAGCTGCCTGAGACTTTTTTTCACCTTGAGAAACTTGAAATTCTTATTTTAGATGGTTGCCAAAACTTAAAAAGACTACCCGATAACATAGGACTTTTGTGCTCTCTACAAGAGCTGTCTCTCGACAAATCTGGGTTAGAAGAACTACCCGAAACTGTCGGGCATTTGAAAAAACTAGAGAAGCTTGGTTTGATGCATTGCTATTCTCTCACTAAGATTCCTGATTCTGTTGGAAACCTCGTTTCGCTTTCAGAACTTATGCTTTCTGGAAGTGCTATTAGAGAGCTTCCTTCTTCCATTGAATCATTGTCTTATCTAAACGAACTCTCTGTAGGATATTGTAAGTCTCTGAAAAAGTTGCCTGAGTCTATTAAGCATTTGGCTTCCGTTATTGAGCTTCAGCTAGATGGGACAGCGATCACCTATTTGCCAGATGAAATTGGCGATATGAAATTGCTAAGAAAGCTTGAAATGAGGAATTGCCAGATGAGATCTCTACCTGAATCGATTGGACGCCTCGCAGCTCTTACAACCTTGGACATTTCCAATGGAAACATCGAAGAATTGCCAGACTCCATCAAAGAGATGAAAAATCTTGTTCATTTGACGTTGGACAAATGCATAATGCTCAGAAAGCTTCCTGATTCTATAGGATCTTTGAAGTCCTTGCGTCATCTTGGGATGGTGGAAACAGGTCTGACAGAATTACCTGAAAGCTTTGGTATGCTTACCAGCTTACAAACATTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCACGATTCTTCTGTAATCTCATCTTTTTTCTGCAATATGATATTTCTGAATGATCTGGACGCTCGTTGTTGGAGAATATCTGGAAAAATTCCTGATGATTTTGAGAAGTTGAAGTCTTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCCGGCCTTTCGATTCTGAAAAAGCTCCATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGATAGAGCTGAATGCTGCAAACTGCTGTACCTTACAAAGCATTCCCGACCTTTCAAATTTAACAAGTCTTAAGGATCTAAACCTCACGAATTGTGTAAAAGTGGTGGATATTCCAGGTCTTGAACGGTTGGTGTCTTTGAGGAGTTTGTACTTGGGTGGGTGCATTGCATGCTCCTTCCCAATCCGCAAGAGATTTTCTAAGGTTACAATGAGGAATTTAAGGAACTTGAGCATGCCAGGAACCAGATTACCCAAATGGTTTTCAGGACAAGCTGTAAGCTTTTCGAAGCCCAAGAACCGTGAACTAACAGGTGCAATTATGGGTATCATTCTTTCTATCAACCATGAAACACCGAGTGAACTGCCAGTTGAACTTTCCGGAGTAGTTGATATCAAAGCAAATGTCCTCAGACTGGGCAAAAACATATATAGTTCAGTGTTAGACTTGCATGGGTTGCCAAGAACGAATGATGAACACTTGTACCTTTGTAGATTCCCAGACTACCATCCACTCATCTCTCGCTTGCGAGATGGGGACACATTTTGTGTGACGAAGAAAAACCAACCTATGGATGAGAGATTGGAGTTGAAAAAATGGGCGTTTCATCTGATGTTTGAAGGGGATGACGATTATGATGGAGATGAAGAATCTGCGGATAGAAGCCTACAATTTGTGTCAGAAAAGCTGGCCAAGTTTTTCAACACTTACGAAGAAGATGGCCCCATGGATGATGATATTGGGAGTGGAGATGAAGAGTGCCTGAAGGAAGAAAGAGTATTATCGTGCTTGAAGCGGATAACCTCATGTCTCTAG 4167 0.4315 MSPEGHVMSSTPGDFRLPWDVFLSFRGADTRDCLAKPLHKALQSRGVRVFLDDVGLDRGDQIAPSLLEAIDDSASSIIIISPDYASSHWCLEELAKICDCERLILPVFYYVGPTDVLEQTGPFEDSFKIHEAKRSEDEVIRWRKAMKKVGGLAGWVFQNPSQEDHLIGLLVQRILKELINTPVGVAEFTVGLDARIEELLELLDMRSNGMRVLGLHGMGGIGKTTLAKAFFNRIVVDFDHRSFISSVREVSSKDEGLISLRNRIISDISSQTVVGNDISAFRRTVSENRALVILDDVDDVKQLDTLIGKREWFHEGSRILVTSRDTRALPETHVNVLYEVQILDDSESLELFCYHAMRRKKPAGETFLKLSKEIVSLTRRLPLALEVLGSMLFRKRREKKEWVDAEEKLKVIRPWNLQEVLRISYEGLDEQEKCIFLDIACLFVPMRMKREDVIDVLRGCRYGGEIAITDLTEKCLIKIREDETIWMHDEIRDMGRQIDVEENLVEPGMPGRLWDRSEILAVLRNMKGSSSIRGMVLDFEERSTKDNEQAISCCNLKSGSSFVNALSFLKQIHGKYFQRVERDKEVTVLRTKPFESMVNLVLLQINNLRLEGKFKSFPAELKWLQWQGCPLKCMPSDFWPQELAVLDLAHSYIENLWNRKGYKVPKNLMVMNLSYCYHLEALPDLSGCRCLEKIVLVNCIKLRRIHDSVGGLSTLRHLNMTRCTELSELPNDLSGLKNLESLCLSDCCKLKSLPRNIANWKSLRKLLANGTALAELPETFFHLEKLEILILDGCQNLKRLPDNIGLLCSLQELSLDKSGLEELPETVGHLKKLEKLGLMHCYSLTKIPDSVGNLVSLSELMLSGSAIRELPSSIESLSYLNELSVGYCKSLKKLPESIKHLASVIELQLDGTAITYLPDEIGDMKLLRKLEMRNCQMRSLPESIGRLAALTTLDISNGNIEELPDSIKEMKNLVHLTLDKCIMLRKLPDSIGSLKSLRHLGMVETGLTELPESFGMLTSLQTLKMANKSENNLLHDSSVISSFFCNMIFLNDLDARCWRISGKIPDDFEKLKSLETLNLSQNKFHSLPSSLAGLSILKKLHLQNCIELVSLPALPSSLIELNAANCCTLQSIPDLSNLTSLKDLNLTNCVKVVDIPGLERLVSLRSLYLGGCIACSFPIRKRFSKVTMRNLRNLSMPGTRLPKWFSGQAVSFSKPKNRELTGAIMGIILSINHETPSELPVELSGVVDIKANVLRLGKNIYSSVLDLHGLPRTNDEHLYLCRFPDYHPLISRLRDGDTFCVTKKNQPMDERLELKKWAFHLMFEGDDDYDGDEESADRSLQFVSEKLAKFFNTYEEDGPMDDDIGSGDEECLKEERVLSCLKRITSCL 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00050 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 439 IPR027417 -
Pral3533g00050 1388 SMART till_3 18 152 IPR000157 GO:0007165
Pral3533g00050 1388 SUPERFAMILY L domain-like 487 921 - -
Pral3533g00050 1388 Pfam TIR domain 19 178 IPR000157 GO:0007165
Pral3533g00050 1388 Gene3D Ribonuclease Inhibitor 798 888 IPR032675 -
Pral3533g00050 1388 Gene3D Ribonuclease Inhibitor 889 1259 IPR032675 -
Pral3533g00050 1388 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 803 IPR044974 GO:0006952
Pral3533g00050 1388 PRINTS Disease resistance protein signature 781 797 - -
Pral3533g00050 1388 PRINTS Disease resistance protein signature 212 227 - -
Pral3533g00050 1388 PRINTS Disease resistance protein signature 284 298 - -
Pral3533g00050 1388 PRINTS Disease resistance protein signature 378 392 - -
Pral3533g00050 1388 Gene3D - 182 336 IPR027417 -
Pral3533g00050 1388 Gene3D - 18 181 IPR035897 -
Pral3533g00050 1388 SMART LRR_typ_2 807 830 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 854 877 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 901 924 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 736 760 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 1071 1094 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 947 970 IPR003591 -
Pral3533g00050 1388 SMART LRR_typ_2 994 1016 IPR003591 -
Pral3533g00050 1388 Gene3D Ribonuclease Inhibitor 580 797 IPR032675 -
Pral3533g00050 1388 Pfam NB-ARC domain 194 410 IPR002182 GO:0043531
Pral3533g00050 1388 ProSiteProfiles Leucine-rich repeat profile. 1073 1095 IPR001611 GO:0005515
Pral3533g00050 1388 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 155 IPR035897 -
Pral3533g00050 1388 SMART LRR_bac_2 783 803 - -
Pral3533g00050 1388 SMART LRR_bac_2 665 685 - -
Pral3533g00050 1388 SMART LRR_bac_2 947 966 - -
Pral3533g00050 1388 SMART LRR_bac_2 877 897 - -
Pral3533g00050 1388 SMART LRR_bac_2 1115 1135 - -
Pral3533g00050 1388 SMART LRR_bac_2 1071 1090 - -
Pral3533g00050 1388 SUPERFAMILY L domain-like 891 1201 - -
Pral3533g00050 1388 Gene3D - 342 429 IPR042197 -
Pral3533g00050 1388 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00050 Pral-Chr3533 709984 716520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00050 19 883 WRKY Transcription Factor Family AT4G12020 29.101 1.88e-76 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00050 - - lang:109340539 1610.51