Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00033 ATGTCTCGCTCTTGCTCGCAGTGTGGCAACAACGGCCATAACTCGCGAACATGCATCCACGGCGGCAGCGGCGGCGGCGATTCGTCGAAGGAGAACGGGATTATGCTGTTTGGCGTGCGACTTACTCAAGGGAACTCGTTCAGGAAGAGCGCTAGTATGACGAATCTGTCGCAGTTTGAGGCTCAGCCTCAGGATTCCAACGCCGTCGATGCTGGTTACGCTTCCGATGACGTCGTTCACGCCTCTGGACGGACTCGTGAGCGTAAGAGAGGTGTTCCCTGGACGGAGGAAGAGCATAGGTTATTCCTATTGGGATTACAGAAAGTCGGAAAAGGAGATTGGAGAGGGATTTCTAAGAACTTCGTCAAAACTCGGACGCCGACTCAGGTGGCTAGTCATGCTCAGAAGTACTTCCTTCGTCGCCACAACCAGAATCGGAGACGCCGCAGATCTAGTCTCTTTGACATCACCACCGATACGGTGATGGAATCCTCTTTAATGGAAGAAGAACAAGTTCACCAAGAAGCGGCGATCCCGCCCACACATCCACAGTTATATTACGGAGGCTTTCCCAGTTCAACTTTTCCGACGAAGGTGATGGCGGGAGAGAGACCAGCAAAACCTATTAGGCCGATACCAGTCCCTCCATCATCGAAAATGGCCACTCTAAATTTGAAAGAGAAAGCTCCAATAGACCCCCTACCATTATCTCTGAAGCTGCCAACGTCGCCGTCAACATCAAATGAGCAGTCACCGGCAAGCAGCCAATCGTCGCCGTCAACAGATTTTCAGGCTATGTCTGGCAACTTCAGCGGCGGTGGAGATAGCATAATCAGCGTGGCTTGA 846 0.5213 MSRSCSQCGNNGHNSRTCIHGGSGGGDSSKENGIMLFGVRLTQGNSFRKSASMTNLSQFEAQPQDSNAVDAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSLMEEEQVHQEAAIPPTHPQLYYGGFPSSTFPTKVMAGERPAKPIRPIPVPPSSKMATLNLKEKAPIDPLPLSLKLPTSPSTSNEQSPASSQSSPSTDFQAMSGNFSGGGDSIISVA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00033 281 PANTHER TRANSCRIPTION FACTOR KUA1 1 245 - -
Pral3533g00033 281 SUPERFAMILY Homeodomain-like 88 141 IPR009057 -
Pral3533g00033 281 CDD SANT 93 138 IPR001005 -
Pral3533g00033 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Pral3533g00033 281 MobiDBLite consensus disorder prediction 1 22 - -
Pral3533g00033 281 Gene3D - 92 143 - -
Pral3533g00033 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Pral3533g00033 281 MobiDBLite consensus disorder prediction 1 29 - -
Pral3533g00033 281 MobiDBLite consensus disorder prediction 239 281 - -
Pral3533g00033 281 FunFam transcription factor MYB1R1 92 143 - -
Pral3533g00033 281 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Pral3533g00033 281 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Pral3533g00033 281 MobiDBLite consensus disorder prediction 205 281 - -
Pral3533g00033 281 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Pral3533g00033 281 SMART sant 90 140 IPR001005 -
Pral3533g00033 281 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00033 Pral-Chr3533 434476 460007 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral3533g00033 Myb_DNA-binding 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00033 - - qsu:111996955 340.502