Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00029 ATGGTGGTGGCTATTCTGATACAAACAATAAGCCAAGTGGTAACCAAAATTGCCCTCAATGGTGGCATTAACACATATGTCTTGGCTTTCTACTCCTACGCTCTCTCATCTTTTCTCCTTCTTCCCTTCATCGCCTTCCTTTTCCACAGGTCTCAAGCACCTCCTCTTAACTTCTCCTCCATTTGCAGATTCTTCTTGCTTGCCATCTTTGGAAGCTCAGGGACTGTACTTGCTTATGTTGGCTTAGATTTAAGCTCACCGACAATGGCCGCTGCCTTGCTGAACCTTATTCCTGCTTTCACTTTTGTGCTTGCTCTCATTTTCAGGATGGAAATAGTACATTTCGGAGAAAAGAGCAGCCAAGCCAAAGTGTTAGGAACAATAGTATCAATTGGTGGAGCATTTGTTGTGATATTCTACAAGGGCCCACCAATCTTCAAGAATCATTCTTCAGCATCTTCTTATAAGCAGGTTTTGTCGTTAACACAATCCAACTGGGTCCTTGGAGGCTTTTATTTAGCTACTGAATCTTTCATTGCTTCACTTTGGTACATTTACCAGGCATCAGTCATTAAGAGCTACCCTTCTGTAATGGTGGTAGTCTTCTTCCAAATTCTCTTCTCAACAATTCTGTCAGCAATATTTGCCATAATTGTAGTTGCAGATCTATCAGCATGGGTCTTAAGACTTGACATGGGCTTGGTTTGCATTATCTACCAGGCAGTGGTTGCCGTAGTGATTCGCTTCATTCTATACACATGGAGTGTGAAGAAAGCTGGACCTCTGTTTTGTACAATGTTCAAGCCTGTAGGAATCATTTTCACTGTTATCATGGGTGCACTTTTTCTGGGGGATGATTTTCACCTTGGAAGTTTGGTGGGCGCGGTTATAATTGTGTTGGGATTTTATGCTGTGATTTGGGGCAAAGCTAAAGAAGAGAGGAAGGCTGAAGCAAGGTTTGAAAACCTGGAGTCATCTTGCCATACTGCTCCTCTGCTGCAAAACAAGACTTAA 1014 0.425 MVVAILIQTISQVVTKIALNGGINTYVLAFYSYALSSFLLLPFIAFLFHRSQAPPLNFSSICRFFLLAIFGSSGTVLAYVGLDLSSPTMAAALLNLIPAFTFVLALIFRMEIVHFGEKSSQAKVLGTIVSIGGAFVVIFYKGPPIFKNHSSASSYKQVLSLTQSNWVLGGFYLATESFIASLWYIYQASVIKSYPSVMVVVFFQILFSTILSAIFAIIVVADLSAWVLRLDMGLVCIIYQAVVAVVIRFILYTWSVKKAGPLFCTMFKPVGIIFTVIMGALFLGDDFHLGSLVGAVIIVLGFYAVIWGKAKEERKAEARFENLESSCHTAPLLQNKT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00029 337 Pfam EamA-like transporter family 171 306 IPR000620 GO:0016020
Pral3533g00029 337 Pfam EamA-like transporter family 2 138 IPR000620 GO:0016020
Pral3533g00029 337 PANTHER WAT1-RELATED PROTEIN 1 317 IPR030184 GO:0016020|GO:0022857
Pral3533g00029 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 311 - -
Pral3533g00029 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00029 Pral-Chr3533 383419 388856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00029 11 313 Nodulin-like Gene Family AT5G40240 41.424 7.25e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00029 - - gmx:100816194 435.647