Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00028 ATGGTGGTGGCTATTCTGATACAAACAATAAGCCAAGTGGTAACCAAAATTGCCCTCAATGGTGGCATTAACACATATGTCTTGGCTTTCTACTCCTACGCTCTCTCATCTTTTCTCCTTCTTCCCTTCATCGCCTTCCTTTTCCACAGATTCTTCTTGCTTGCCATCTTTGGAAGCTCAGGGACTGTACTTGCTTATGTTGGCTTAGATTTAAGCTCACCGACAATGGCCGCTGCCTTGCTGAACCTTATTCCTGCTTTCACTTTTGTGCTTGCTCTCATTTTCAGGATGGAAATAGTACATTTCGGAGAAAAGAGCAGCCAAGCCAAAGTGTTAGGAACAATAGTATCAATTGGTGGAGCATTTGTTGTGATATTCTACAAGGGCCCACCAATCTTCAAGAATCATTCTTCAGCATCTTCTTATAAGCAGGTTTTGTCGTTAACACAATCCAACTGGGTCCTTGGAGGCTTTTATTTAGCTACTGAATCTTTCATTGCTTCACTTTGGTACATTTACCAGGCATCAGTCATTAAGAGCTACCCTTCTGTAATGGTGGTAGTCTTCTTCCAAATTCTCTTCTCAACAATTCTGTCAGCAATATTTGCCATAATTGTAGTTGCAGATCTATCAGCATGGGTCTTAAGACTTGACATGGGCTTGGTTTGCATTATCTACCAGGCAGTGGTTGCCGTAGTGATTCGCTTCATTCTATACACATGGAGTGTGAAGAAAGCTGGACCTCTGTTTTGTACAATGTTCAAGCCTGTAGGAATCATTTTCACTGTTATCATGGGTGCACTTTTTCTGGGGGATGATTTTCACCTTGGAAGTTTGGTGGGCGCGGTTATAATTGTGTTGGGATTTTATGCTGTGATTTGGGGCAAAGCTAAAGAAGAGAGGAAGGCTGAAGCAAGGTTTGAAAACCTGGAGTCATCTTGCCATACTGCTCCTCTGCTGCAAAACAAGACTTAA 975 0.4226 MVVAILIQTISQVVTKIALNGGINTYVLAFYSYALSSFLLLPFIAFLFHRFFLLAIFGSSGTVLAYVGLDLSSPTMAAALLNLIPAFTFVLALIFRMEIVHFGEKSSQAKVLGTIVSIGGAFVVIFYKGPPIFKNHSSASSYKQVLSLTQSNWVLGGFYLATESFIASLWYIYQASVIKSYPSVMVVVFFQILFSTILSAIFAIIVVADLSAWVLRLDMGLVCIIYQAVVAVVIRFILYTWSVKKAGPLFCTMFKPVGIIFTVIMGALFLGDDFHLGSLVGAVIIVLGFYAVIWGKAKEERKAEARFENLESSCHTAPLLQNKT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00028 324 Pfam EamA-like transporter family 158 293 IPR000620 GO:0016020
Pral3533g00028 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 128 - -
Pral3533g00028 324 PANTHER WAT1-RELATED PROTEIN 1 304 IPR030184 GO:0016020|GO:0022857
Pral3533g00028 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00028 Pral-Chr3533 383419 388856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00028 11 300 Nodulin-like Gene Family AT5G40240 40.584 6.47e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00028 - - gmx:100816194 409.453