Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3533g00018 ATGTCGGTTTCCTGCTCCGATCACTACTTCTGTGACTCCGACCTTCTTTGCAGCGAGGATACATCCGGAATCTTGTCCGGAGAGTCGCCGGAGTGCTCCTCCGACCTTGATTCCTCGCCATCGCCAGTAGTTCCAGAGGAGTCGATAGCCGGATTCATCGAAGAGGAGCGCAACTTCGTTCCTGGATTCGATTATTTCTCCAGAGTTCAATCTCATTCGCCCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAAGCACACTATGGTTTTCAGCCGCTGACGGCGTATCTTTCCGTCAACTATTTGGACCGGTTTTTGGATTCTCGGGAGTTTCCTCAATCGGATGGGTGGCCGATGCAACTTTTATCTGTTGCTTGTTTGTCATTAGCTGCAAAAATGGAGGAACCTTTAGTTCCGCCCCTTTTGGATCTACAGGTAGAAGGTGCCAAATATATATTTGAGCCAAGAACAATTCGTCGGATGGAACTACTTGTTCTGAGTGTTCTGGATTGGAGGCTAAGATCAATCACGCCATTCAGTTTCATAGATTTCTTTGCTTGCAAACTGGATCCAACGGGAACTTTCACTGGGTTACTCATTTCTCGGGCTACAGAAATAATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCCTATCGGCCATCATGTATTGCTGTCGCGGCCATACTTTGCTCAGCTAATGAAATTCCTAACTGGTCTCTTGTTAAGCCTGAGCATGCTCAGTCATGGTGCCAGGGACTGATAAAAGAGAAAATCATAGGTTGCTACCAGTTGATCCAAGAACTTGTGGTTGACAATAATCGGAGGAAGCTGCCTAAAGTCTTACCACAGTTGCGAGTAACGATCCAACCCAGAGTGAGTTCAAGTATTTTATCTTCGTCTTCGTCTTCTTCCTCCTCCTCCTCTTCGTCGTCGCCTAGTAAAAGGAGGAAATTAAATAACTGCTTGTGGGTGGATGATGACAAAGGAAATGCCCAGTGA 1017 0.4671 MSVSCSDHYFCDSDLLCSEDTSGILSGESPECSSDLDSSPSPVVPEESIAGFIEEERNFVPGFDYFSRVQSHSPDASAREESVAWILKVQAHYGFQPLTAYLSVNYLDRFLDSREFPQSDGWPMQLLSVACLSLAAKMEEPLVPPLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSITPFSFIDFFACKLDPTGTFTGLLISRATEIILSNIQEASFLAYRPSCIAVAAILCSANEIPNWSLVKPEHAQSWCQGLIKEKIIGCYQLIQELVVDNNRRKLPKVLPQLRVTIQPRVSSSILSSSSSSSSSSSSSSPSKRRKLNNCLWVDDDKGNAQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3533g00018 338 Pfam Cyclin, C-terminal domain 181 291 IPR004367 -
Pral3533g00018 338 Gene3D - 53 242 - -
Pral3533g00018 338 SMART cyclin_7 84 172 IPR013763 -
Pral3533g00018 338 SMART Cyclin_C_2 181 312 IPR004367 -
Pral3533g00018 338 PANTHER CYCLINS 54 278 IPR039361 -
Pral3533g00018 338 SUPERFAMILY Cyclin-like 46 178 IPR036915 -
Pral3533g00018 338 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Pral3533g00018 338 MobiDBLite consensus disorder prediction 300 338 - -
Pral3533g00018 338 CDD CYCLIN_AtCycD-like_rpt2 181 271 - -
Pral3533g00018 338 MobiDBLite consensus disorder prediction 300 323 - -
Pral3533g00018 338 Gene3D - 62 179 - -
Pral3533g00018 338 FunFam D2/4-type cyclin 62 179 - -
Pral3533g00018 338 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Pral3533g00018 338 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3533g00018 Pral-Chr3533 226861 230351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3533g00018 1 338 Core Cell Cycle Gene Families AT1G70210 61.765 6.96e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3533g00018 K18810 - gmx:100775224 491.5