Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral352g00006 CTAGAAGATTCAATAGTTGTACGTGGCTTGGACACTGTCGCACCATCTGTGTTGATCCAAGAACGTGAAACAGTGAGCTCGAATAATGGCATGTTCACTCTGGGATTCTTCAGGCCTCGGAATTCCACAAATTGCTACCTAGGAATTTGGTTCATGTCTGAATCCTCTGTTGTTTGGGTGGCTAACAAAAACGACCCACTGACAGATCCTTCAGGGATTCTCACAATATCAGGGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAACAGGTTGTTTGGTCAACCAATGTCTCAATGGCATCAAATTCTAGTGCCCAACTCTTAGATTCTGGCAACCTTGTACTCATTGATAGAACGACTGGCGCATTCCTGTGGCAGAGTTTCCAGCATCCTGATAATACATTATTACAAAACATGAAATTCAGTACTAATATGCAACTTACATCATGGAAAAGTACATCAGATCCATCCTATGGAGGATTTTCTTGCGGCCTTAAACCTCTTAATGCTACTGAAGTGTTTGTATGGAAAGAAAATCATCCTTACTGGCGTAGTGGTCCCTGGAATGGCACACACTTTCTTGGGGTACCCCAGAGTTCATCTATGTCCCTAAATGAGTTTCAGATGCAAGGAGAGCTGGGAGGGAGTTTTGACCTATATTTTCATTACACAGACAAGTCTGCATTGCTAACTCTAAAGTTAGGTCACAAAGGTAAACTCAAAAAACAACGTTGGAATTCTCACACGAATTTATGGGATCGTGAGTGGGTAAGTGAGAATTCTGTGTGTGATATTTATGGCAAATGTGGCCCATTTGGGATCTGCAATTCTCTAAGCTCACCAATTTGCAGCTGCTTGAGAGGGTTTGAACCAAATAACGAAGAAGAATGGGGAAGGCAAAATTGGACCAGTGGGTGCGTGAGAAGAGAAGCACTTCAGCAAGAGAGGGACAAAAATTTTTCTCAAGCCAGCAAGCCAGATGGGTTCTTGAAGCTGGAGAGGGTAAAGCTACCAGATCATGCAGAAGCGTCACCTTCTAACTTTGCCAAGGATTCTGCAGATTGCCAAACTCGATGCCTGAAGAATAGCTCTTGTATAGCTTATGCCTATGATAAAAGCCTTGGCTGTATGGTATGGAATGCAGATTTACTTGACATACAAAGTTTCTCAGTTGGAGGAGTTGATCTTTTCATACGTTTGGCCTACTCAGAACTAGATAAGGCCAGGAGGAACATGGTAACACCTATTATAATACCAACTCTGATAGGAACAATTTTTATCATGGCCTTGGGATATTTCTTATGGAAGATGAGGTCAAAGCAAAAAGGGAAAACGCAGATGCAGATTCATGACAAAAGAAGGATTTCAAACTTGAAGCAAGCTCATAATCAAGAGCTATCATTTTTTTATTTTAGAAAGTTGGCAATTGCAACAAACAACTTTGACTTGGCAAATAAACTTGGGCAGGGCGGTTTTGGTCCTGTTTACAAGGGAAAGTTTGAAGACGGACAAGAAATAGCAGTAAAAAGATTATCAAGATCATCTAGGCAGGGCATTGAAGAGTTTATTAATGAAGTGGAGTTGATTTCCAATCTTCAACACCGAAATCTTGTTAGACTACTTGGTTGTTGCATTGAAGAAGATGAAGAGATATTAGTTTATGAATACATGACAAACAAAAGCTTGGATGCATATATCTTTGATCCGCTGCAACAAAAGTACTTAGATTGGAGAAGGCGCTTCAACATCATTGAAGGAATAGCTAGAGGATTACTTTATCTTCATAGAGATTCCAGATTAAGAATTATACATAGGGATTTGAAGGCAAGTAACATACTGTTGGATGAAGAGATGAATCCAAAGATATCAGATTTTGGGATGGCAAAACTTTTTGGAGGTGGTCAAAATCAAGCAAATACAGAAAGAATTGTTGGAACATATGGATATATTTCCCCAGAATATGCAACTGAGGGACTCTATTCAGAGAAATCTGATGTTTTTAGTTTTGGTGTTTTGCTACTAGAGATTATTAGTGGAAGGAAAAACACTAGCTTTTATGAAGATGCAGAATCTTTGACACTTTTAGGATTTGCATGGAAATTATGGATCAATGCCAATGTTATACCGCTGATAGATCCACGAATATATGATCCAATCTTTCATGAAGATATATTGAAGTGCACACATATAGGTCTTTTATGTGTACAAGAACTTGCAAAGGATAGGCCTATTATGGCCTCGGTAATGTCAATGCTTCAAAGTGAGATTGTAGATCTTCCTCCCCCAAGCCAACCCGCATTCATCCTTAGGCAGACTATGTCTCATGCAACAGAACAAAGTCCAAGAAGTAATGAATTATGTTCCATCAATAAAGTAACTATCTCTAATTTTGAGGGGAGATAG 2403 0.3945 LEDSIVVRGLDTVAPSVLIQERETVSSNNGMFTLGFFRPRNSTNCYLGIWFMSESSVVWVANKNDPLTDPSGILTISGNGNLVVLNGQKQVVWSTNVSMASNSSAQLLDSGNLVLIDRTTGAFLWQSFQHPDNTLLQNMKFSTNMQLTSWKSTSDPSYGGFSCGLKPLNATEVFVWKENHPYWRSGPWNGTHFLGVPQSSSMSLNEFQMQGELGGSFDLYFHYTDKSALLTLKLGHKGKLKKQRWNSHTNLWDREWVSENSVCDIYGKCGPFGICNSLSSPICSCLRGFEPNNEEEWGRQNWTSGCVRREALQQERDKNFSQASKPDGFLKLERVKLPDHAEASPSNFAKDSADCQTRCLKNSSCIAYAYDKSLGCMVWNADLLDIQSFSVGGVDLFIRLAYSELDKARRNMVTPIIIPTLIGTIFIMALGYFLWKMRSKQKGKTQMQIHDKRRISNLKQAHNQELSFFYFRKLAIATNNFDLANKLGQGGFGPVYKGKFEDGQEIAVKRLSRSSRQGIEEFINEVELISNLQHRNLVRLLGCCIEEDEEILVYEYMTNKSLDAYIFDPLQQKYLDWRRRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEEMNPKISDFGMAKLFGGGQNQANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDAESLTLLGFAWKLWINANVIPLIDPRIYDPIFHEDILKCTHIGLLCVQELAKDRPIMASVMSMLQSEIVDLPPPSQPAFILRQTMSHATEQSPRSNELCSINKVTISNFEGR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral352g00006 800 SMART ntp_6 324 400 IPR003609 -
Pral352g00006 800 SMART blect_4 16 131 IPR001480 -
Pral352g00006 800 CDD PAN_AP_plant 321 401 - -
Pral352g00006 800 Gene3D - 6 130 IPR036426 -
Pral352g00006 800 SMART serkin_6 481 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral352g00006 800 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 743 - -
Pral352g00006 800 ProSiteProfiles Bulb-type lectin domain profile. 10 128 IPR001480 -
Pral352g00006 800 Gene3D Phosphorylase Kinase; domain 1 439 556 - -
Pral352g00006 800 Pfam D-mannose binding lectin 57 149 IPR001480 -
Pral352g00006 800 SUPERFAMILY Protein kinase-like (PK-like) 465 782 IPR011009 -
Pral352g00006 800 Pfam Domain of unknown function (DUF3403) 754 800 IPR021820 GO:0004674
Pral352g00006 800 CDD STKc_IRAK 487 753 - -
Pral352g00006 800 Gene3D Transferase(Phosphotransferase) domain 1 557 758 - -
Pral352g00006 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Pral352g00006 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 47 156 IPR036426 -
Pral352g00006 800 ProSiteProfiles Protein kinase domain profile. 481 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral352g00006 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 6 128 - -
Pral352g00006 800 Pfam S-locus glycoprotein domain 183 292 IPR000858 GO:0048544
Pral352g00006 800 Pfam PAN-like domain 325 386 IPR003609 -
Pral352g00006 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 556 - -
Pral352g00006 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 557 760 - -
Pral352g00006 800 ProSiteProfiles PAN/Apple domain profile. 324 401 IPR003609 -
Pral352g00006 800 CDD B_lectin 23 131 IPR001480 -
Pral352g00006 800 Pfam Protein kinase domain 483 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral352g00006 800 PIRSF SRK 5 800 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral352g00006 Pral-Chr352 89239 93900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral352g00006 425 770 Receptor kinase-like Gene Family AT4G23150 53.757 1.40e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral352g00006 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral352g00006 - - pcin:129286407 981.474