Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral352g00003 ATGTTCTTCATGAGATTCGATAAAAAAGCTTGGTTTTTACTTGCTTTATTCCTTATATTTTCGTTCTCTTCTACTCTTATGGTCTGTGCCTTGGATTCCATTACATCTTCTCTGTTGATCCAAGAACCTGAAACAGTGAGCTCAAGGAATAACATGTTCACGCTGGGATTCTTCAGTCCTCAAAATTCCACCAATCGTTACGTAGGAATTTGGTACATGACCAAATCCTCTATTGTTTGGGTTGCTAACAAAAACAACCCAATATCAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTCGTTTTGGATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCCCATATTGCATCAAATTCCAGTGCTCAACTCTTAGATTCTGGCAACCTCGTCCTTGCAGATGGAAGTTCAGGGGCATATAGGTGGCAGAGCTTCCTACATCCTAGTAATACATTATTACAAGGCATGAAATTGATTGCTTACAGAAAAACAGGCAAGAAAGTGAAAATTACATCATGGAAAAGTCCATCTGATCCATCTGATGGAATATTTTCTTGTGCTCTTGAAATCCGTAACGTGACTGAAATATTCCTGAGGGAAGGAACTCGTCCTAGATGGCGCAGTGGTCCTTGGAATGGCTTAGACTTTCTTGGGATAACTAGGGTAATTTCAACTAACAACCAAAATGGGATTCGGATGGAAGAAGATGAAGACAGTTCTAGATTATCTTTTTATATATACAATGTTATCTGGGCTTATACTTTGGTTCCTCAAGGTAAATTAGAGCGAAGACGTTGGAATCCCCAGACACATACATGGGAACTTTTGAGGTCATTAGGATCTTCACAGTGTGATGCTTATGGCAAATGTGGCCAATTTGGGATTTGCAATTCGCAGAGCTCCCCAATCTGTAGCTGCCTGAGAGGCTTTGAACCAAAGAACAAAGAAGAATGGGGAAGGCAGAATTGGACCAGTGGGTGTGTGAGAAGAGTAGCACTTCAGTGTGAAAGAAGCACAAATGATTCTCAAGCTGGCAAAATAGATGGGTTTTTTATGGTGGAGAAAGTGAAAGTTCCAGATGATGCTCAGGTGTCAGCTACTTATGATGCGGATGCTGCAGATTGTCAAACTTCATGCCTCAAGAATTGCTCTTGTAAAGCTTATGCCCTTGAAAGAAACCTTGGCTGTATGATTTGGACTGCAGACTTAGTTGACATACAAAGCTTCTCATATGGAGGACTCGACATTTACATACGTTTAGCCTACTCAGAACTAGGCACGGGCAGGAAGAAAATGACGACACCTATTATAATATCAGTTTTGGTAGGAACAATTCTCATTACTGCATCTGCATATTTCTTGTGGAAAAAACGCTCAAAGAGAAAAGGAGAAATGCAGACTCATGACACTAGGATTATGGCTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTATACAAAGCTAGCTACTGCAACAAGCAACTTTGACATAGCAAATAAACTTGGACAGGGTGGGTTCGGTCCAGTTTACAAGGGAAAGTTGGAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCAAAATTGTCTAGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGTTGATTTCTGGGCTTCAACACCGAAACCTTGTTAAACTTCTTGGCTGTTGCGTTGAAGAAGAACAAATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTATATATCTTCGATCTAAAGCACCAAAAAAAATTTTATTGGGGAAAGCGCTTCAACATAATTGAGGGAATAGCTAGAGGATTGCTTTATCTTCACAGAGATTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTATTAGATGAAGAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTTTATGGAGGCAATGCTGATCATGCAAATACTGAAAGAATTGTCGGAACATATGGCTACATTTCTCCTGAATATGCAACCGAAGGACTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTCTGTTACTAGAAATTATTAGTGGAAGGAAAAACACTAGTTTCAATGAAGATGCAGAATCTTTTACACTTTTAGGATTGGCATGGAAATTATGGATGGATGCCAATATTACACCTCTGATAGATCCACATATATATGATCCAAGCTTTCATAAGGATATATTGAGGTGCATGCATATAGGTCTTCTATGTGTACAAGAACTTGCAAAAGATAGACCTACTATGGCATCTGTCATGTCAATGCTTCAAAGTGAGAATATGGATATTCCTCCTCCAAGCCAACCAGCATTCATCCTCAGACAAACCATGCCCTACACTACAAGGCAAACTTATGATAATGATGAGTTTGGTTCCATCAATAGTTTAACGTTCTCAAAATTTGAAGGAAGATAG 2466 0.3844 MFFMRFDKKAWFLLALFLIFSFSSTLMVCALDSITSSLLIQEPETVSSRNNMFTLGFFSPQNSTNRYVGIWYMTKSSIVWVANKNNPISDSSGILTISENGNLVVLDGQKQVVWSTNVSHIASNSSAQLLDSGNLVLADGSSGAYRWQSFLHPSNTLLQGMKLIAYRKTGKKVKITSWKSPSDPSDGIFSCALEIRNVTEIFLREGTRPRWRSGPWNGLDFLGITRVISTNNQNGIRMEEDEDSSRLSFYIYNVIWAYTLVPQGKLERRRWNPQTHTWELLRSLGSSQCDAYGKCGQFGICNSQSSPICSCLRGFEPKNKEEWGRQNWTSGCVRRVALQCERSTNDSQAGKIDGFFMVEKVKVPDDAQVSATYDADAADCQTSCLKNCSCKAYALERNLGCMIWTADLVDIQSFSYGGLDIYIRLAYSELGTGRKKMTTPIIISVLVGTILITASAYFLWKKRSKRKGEMQTHDTRIMALKQVHIPELLLFDYTKLATATSNFDIANKLGQGGFGPVYKGKLEDGKEIAVKRLSKLSRQGMEEFINEVELISGLQHRNLVKLLGCCVEEEQILVYEYMPNKSLDLYIFDLKHQKKFYWGKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMAKLYGGNADHANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFNEDAESFTLLGLAWKLWMDANITPLIDPHIYDPSFHKDILRCMHIGLLCVQELAKDRPTMASVMSMLQSENMDIPPPSQPAFILRQTMPYTTRQTYDNDEFGSINSLTFSKFEGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral352g00003 821 Gene3D - 27 150 IPR036426 -
Pral352g00003 821 Pfam D-mannose binding lectin 78 179 IPR001480 -
Pral352g00003 821 CDD STKc_IRAK 509 774 - -
Pral352g00003 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Pral352g00003 821 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Pral352g00003 821 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral352g00003 821 SMART blect_4 37 153 IPR001480 -
Pral352g00003 821 SMART serkin_6 503 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral352g00003 821 SUPERFAMILY Protein kinase-like (PK-like) 487 801 IPR011009 -
Pral352g00003 821 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Pral352g00003 821 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pral352g00003 821 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672|GO:0006468
Pral352g00003 821 CDD PAN_AP_plant 336 426 - -
Pral352g00003 821 ProSiteProfiles PAN/Apple domain profile. 340 426 IPR003609 -
Pral352g00003 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Pral352g00003 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pral352g00003 821 Pfam PAN-like domain 351 411 IPR003609 -
Pral352g00003 821 ProSiteProfiles Protein kinase domain profile. 503 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral352g00003 821 SMART ntp_6 350 425 IPR003609 -
Pral352g00003 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Pral352g00003 821 CDD B_lectin 44 153 IPR001480 -
Pral352g00003 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 150 - -
Pral352g00003 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 764 - -
Pral352g00003 821 PIRSF SRK 4 821 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral352g00003 Pral-Chr352 68186 72682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral352g00003 451 816 Receptor kinase-like Gene Family AT4G23150 51.226 2.14e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral352g00003 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral352g00003 - - pcin:129286407 1038.48