LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral352g00002	ATGTTACCTTACTATAACTTCACAGATGCTATAGATTGTAAAACTCCATGCTTGAAGAATTGCTCTTGCAAAGCTTATGCCTATGGAACAGGCATTGGCTGTATGGTTTGGAATGTAGATTTAGTTGACATAATAAGCAACTCACCAGGAGGGGTGGATCTTTACTTACGTCTTGCCTCCTCAGAACTAGTTAGAAAAAGAAGTCTAAGTGAATTTTGCTCTCGTCTTAGATACAGGACCTACAGGTACAAGCAAGAGGAATATGACGACAACAATTCTAATATCAGTTCTGGCAGGAACTATTCTCGTTACAGCATCTGGATTTTTCTTATGCAAAAAAGGGTCAAAGCTAAAAGAAAGTTGGCAACTGCAACAAACGACTTTGACAAGGCAAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTATATAAGGGGAAATTCAAAGATGGACAAGAAATAGCAGTAAAAAGATTGTCAAGATCATCTGGACAGGGTGTTGAAGAATTTATTAATGAAGTAGAGTTGATTTCTAATCTTCAACATGAAAACCTTGGTAAACTTCTTGGTTGTTGCATTGAAGAAGAAGAAATGCTAGTTTGTGAGTATTTACCAAACAAGAGTCTAAATACATATATCTTTGATCCATTGCAACAAAAATGCTTGGGATGGGAAAAACGCTTCAACATTATTGAGGGAATAGTGAGAGGATTACTTTATCTTCATAGAGATTCAAGATCAAGAATTGTACATAGAGATTTGAAGGCAAGTAATATATTATTAGATGAAGGGATAAATCCAAAAATATCATATTTTGGAATGGCTAAACTTGTTAAAGATGGTCAAGATCAGGCACATATAGAAAGAATTGTTGGAACGTTTGGCTATATTTCTCTTGAAAGTGCAACTGAAGGACTCTATTCAAAAAAATCAAATGTTTTTAGCTTTGGTGTTCTATTATTAGAGATTATTAGCAGAAAAAAAAACACTAGCTTTTATGAAGACACAGAATCTTTTACACTTTTAGGCTTCTTCAGACCAACAAAGGATAGTGAAAATGTAAGTAAAGAGGAGAAAGATGAGGAAGAAGAATTTGAGTCAGTCGAGGAAAAAGTTGTCAAAGGAAATGAATTAGAGGAAGAGGAAATTGAAGAAGAAGGAACTAAATCGGAAGATGATAGAAATCAAGAAGAAGAACAAGAAACTCAATCAGAAAAGGAGATGGGTGGAGAAGAAAATAAAAGAAAAGAAGAGGACAAAGAGCAAGAAGAGGACAAAGAAGATGAAGAAGAAAATAAAAGAGAAGAAGAGGATCCAGAGGACAACCAAGGAGAAGGGGAAAAATATGTGAGGAAATCAACAAGGGTGATAAGTAAGGGTAAGGCTCTTAGGTCTCTATTTCTGGAAATTAAAAGTAAGCCCGAGAAAAAGAGAACAATTGATGACAAGCAAGCTTTATTTGACATGTGTACAGCAATGTGTAATGAAAAGGAGCAAAAGCAATACTTTATATTGATGTATGGATACTTCCTAACCCATGATCACTGGTTTTGTTATGTTTTGGAGATAAAGACCATGACCTTCTACGCCCTTGATTCATTGATGAACTATTTCTATACAATGCTGTGTGCTGTGAAGCCAGAATTGCTTGCCAATGAGGACAAAATTGACAATGAAGTGAAATGGGCAAGAGTTTATGTGCAGAATGATGTGTGA	1713	0.3555	MLPYYNFTDAIDCKTPCLKNCSCKAYAYGTGIGCMVWNVDLVDIISNSPGGVDLYLRLASSELVRKRSLSEFCSRLRYRTYRYKQEEYDDNNSNISSGRNYSRYSIWIFLMQKRVKAKRKLATATNDFDKANKLGQGGFGPVYKGKFKDGQEIAVKRLSRSSGQGVEEFINEVELISNLQHENLGKLLGCCIEEEEMLVCEYLPNKSLNTYIFDPLQQKCLGWEKRFNIIEGIVRGLLYLHRDSRSRIVHRDLKASNILLDEGINPKISYFGMAKLVKDGQDQAHIERIVGTFGYISLESATEGLYSKKSNVFSFGVLLLEIISRKKNTSFYEDTESFTLLGFFRPTKDSENVSKEEKDEEEEFESVEEKVVKGNELEEEEIEEEGTKSEDDRNQEEEQETQSEKEMGGEENKRKEEDKEQEEDKEDEEENKREEEDPEDNQGEGEKYVRKSTRVISKGKALRSLFLEIKSKPEKKRTIDDKQALFDMCTAMCNEKEQKQYFILMYGYFLTHDHWFCYVLEIKTMTFYALDSLMNYFYTMLCAVKPELLANEDKIDNEVKWARVYVQNDV	570

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral352g00002	570	MobiDBLite	consensus disorder prediction	421	442	-	-
	Pral352g00002	570	FunFam	Os07g0541700 protein	203	292	-	-
	Pral352g00002	570	SMART	serkin_6	128	502	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral352g00002	570	MobiDBLite	consensus disorder prediction	388	420	-	-
	Pral352g00002	570	Gene3D	Phosphorylase Kinase; domain 1	93	202	-	-
	Pral352g00002	570	MobiDBLite	consensus disorder prediction	349	450	-	-
	Pral352g00002	570	Gene3D	Transferase(Phosphotransferase) domain 1	203	408	-	-
	Pral352g00002	570	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	108	202	-	-
	Pral352g00002	570	ProSiteProfiles	PAN/Apple domain profile.	1	59	IPR003609	-
	Pral352g00002	570	ProSiteProfiles	Protein kinase domain profile.	128	394	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral352g00002	570	Coils	Coil	412	437	-	-
	Pral352g00002	570	Pfam	Protein tyrosine and serine/threonine kinase	131	329	IPR001245	GO:0004672\|GO:0006468
	Pral352g00002	570	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	248	260	IPR008271	GO:0004672\|GO:0006468
	Pral352g00002	570	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	11	342	-	-
	Pral352g00002	570	Coils	Coil	379	399	-	-
	Pral352g00002	570	CDD	PAN_AP_plant	2	59	-	-
	Pral352g00002	570	SUPERFAMILY	Protein kinase-like (PK-like)	101	341	IPR011009	-
	Pral352g00002	570	Coils	Coil	350	370	-	-
	Pral352g00002	570	Pfam	PAN-like domain	7	44	IPR003609	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral352g00002	Pral-Chr352	28084	36793	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral352g00002	119	332	Receptor kinase-like Gene Family	AT4G11530	59.535	5.40e-81	266

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral352g00002		PK_Tyr_Ser-Thr	4.1e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral352g00002	-		-	pcin:129286407	393.66