Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3529g00014 ATGAAGTTTCAAGGGAAAAACTGCTTCATATTGCTTCTATTGTTCATCACTCTTGATCGAGCCTGTTCTCAAACCTCTGCTGCTGATTGCATCCTTGGAATTCAGTCTTCTACATCTTTGAATAACAATAATAGCTCTGATTGTGAATTGCACAGCTGGGGAGGTTTTATAAATAGCTGTTGTGATGGATTAGATTTCAATGCTTACCTTTATGCATCAGGGATGTATGCCAACCAATCTGGAAAAATATACTTGAATTCCTCGGAGCAAGAAACTTGCCTTGCCTCAATGAATATTAAAGGATGTGGGGTGGAGAAGCTAAGGACTGGAGCTGGTGGTTGCTCTGACTTGTCTGTCATAGATGTTATGGACAAACTTGGAGAGAAGTTGAGAAGATTAGATGAAGATTGTATGGCTTTGAGCAAGGCTGGTAGAGAAAAAGAGACTTGTACGGCATGCTTAAGAAGGTGGGAGGAGATTAGTGCAATATCAATTGGTAAAAAGGAGTCAGGCTCAGCAGATTTTGATGCTAATATTTGTAGATTTGCAGTACTAATCTCACTTACAAGCATCAGACTTTATGATAGGGACTCGATTCAAGCAGTTTATGAATGCCTTGGAACCTACAGCCTTTCAGCAGGTAAGCAAATAGGCAAAACCGATGGCAGTTCTAAGCTCATCCCAGGTCTCTGGATATTACCTTTTGGCATAATTGGAATCGTAGTCCTAGGGTTTCTTGCAGTATGTATCTTGAATAGAAGAAGAAGAACTATTAGTTCTCCAACGAAACAAGAAGAGGCAGAGGATTCGAGCTCTCTTAAGATAACCATCAAGGAAGTTTATATGGCGACCAACAATCTTAATGCTTCAAATTATATTGGTCAAGGCATTGCTGGAAAAGTGTACAAAGGTCTACTTTCCAACGGTCAGCATGTAGCCATCAAGCATATTATGGGTGAAGCGTACCTGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCTCATGTCAGACATCAGAACTTGGTATCTTTGGCCGGATACTGTGACAGCGAGGGTGAATGCTTCCTAGTGTATGAGCTATGCCACGAAGGAAACCTCTCAGATTGGCTGTTTGACAAGGATAAAGTTCTTTCATGGATTCAGAGACTTAAGATTGCAGTTGATTGTGCAAGAGGTCTAATGTTTCTCCACACTTATCCAGGTGGCTGCATCATTCATCGTGACATTAAGCCATCAAACATTCTAATTGACACCAACATGCAAGCAAAGCTTTCAGACTTTGGATTGTCCAAGGTAATGGACCTCGACCAATCGTTTGTGAGCTCTGAGGTGAGAGGAACATTAGGTTACATTGATCCTGAATACCGGAAAAACCGCCATGTAAAAGCCTCCGGAGATGTCTACAGTTTTGGAATCGTATTGCTGCAACTTCTTTCAGGACAGAAGGTCATTGACTTCAATTTCCGGAGACCAATGTCCCTAGATAAAATGGTGAGAACCTAA 1503 0.4132 MKFQGKNCFILLLLFITLDRACSQTSAADCILGIQSSTSLNNNNSSDCELHSWGGFINSCCDGLDFNAYLYASGMYANQSGKIYLNSSEQETCLASMNIKGCGVEKLRTGAGGCSDLSVIDVMDKLGEKLRRLDEDCMALSKAGREKETCTACLRRWEEISAISIGKKESGSADFDANICRFAVLISLTSIRLYDRDSIQAVYECLGTYSLSAGKQIGKTDGSSKLIPGLWILPFGIIGIVVLGFLAVCILNRRRRTISSPTKQEEAEDSSSLKITIKEVYMATNNLNASNYIGQGIAGKVYKGLLSNGQHVAIKHIMGEAYLETFVREVRSLSHVRHQNLVSLAGYCDSEGECFLVYELCHEGNLSDWLFDKDKVLSWIQRLKIAVDCARGLMFLHTYPGGCIIHRDIKPSNILIDTNMQAKLSDFGLSKVMDLDQSFVSSEVRGTLGYIDPEYRKNRHVKASGDVYSFGIVLLQLLSGQKVIDFNFRRPMSLDKMVRT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3529g00014 500 FunFam Serine/threonine kinase protein 250 360 - -
Pral3529g00014 500 SMART serkin_6 287 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3529g00014 500 SUPERFAMILY Protein kinase-like (PK-like) 270 486 IPR011009 -
Pral3529g00014 500 Gene3D Transferase(Phosphotransferase) domain 1 362 500 - -
Pral3529g00014 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Pral3529g00014 500 Pfam SPARK 25 164 IPR043891 -
Pral3529g00014 500 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 208 499 - -
Pral3529g00014 500 Pfam Protein kinase domain 291 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3529g00014 500 Coils Coil 123 143 - -
Pral3529g00014 500 FunFam Os07g0541700 protein 362 447 - -
Pral3529g00014 500 Gene3D Phosphorylase Kinase; domain 1 249 360 - -
Pral3529g00014 500 ProSiteProfiles Protein kinase domain profile. 287 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3529g00014 Pral-Chr3529 128544 131252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3529g00014 277 490 Receptor kinase-like Gene Family AT2G39360 47.945 1.46e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pral3529g00014 Pkinase 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3529g00014 - - gsj:114395768 615.15