Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3527g00033 ATGTCAGGTTGTGCTTCATTCTCCTCCACAACTTCCCACCTCAGAACCCTTCCCTCTTCTCTTCCGTCCACCACCATATCTCCTTGTCCTTCCCTCCGATTTTCCCTCACTTTCCGGGAAAATGGAAAACAGGTCGCACCCACAAGCACCTCTGTCCAAAAACGCAATCTTGTTTCATCGAGGTCTGGTAGATTTGTGGTGAAATCCCAGGCCACTAGTGCTCCTACTTCTTCTGAGTCTGTCCAAGTCACACCCGTGCCTTCCCAAATGAAGGCATGGATTTATGGAGAGTATGGGGGAGTTGATGTTTTGAAGTTCGATTCCAACGTTGGTGTGCCTGATTTTAAGGAAGATGAGGTGCTCATTAAGGTTGTCGCTGCGGCTCTTAATCCCGTTGACGCCAAGAGGAGGCAGGGCAAGTTCAAGGCTACTGATTCTCCCCTTCCGACTGTTCCAGGTTATGATGTTGCCGGAATAGTTGCAAAGGTTGGTAGTCAAGTGAAAGACTTCAAAGTGGGTGATGAAGTTTATGGGGACATAAATGAGAAAGCCCTTGAGGGGCCTAAGCAGTTTGGAACTCTGGCAGAGTATACTGCTGTTGAAGCAAGACTGTTAGCACCAAAACCTAAGAATTTGGATTTTGCTCAGGCTGCTGGTCTTCCTCTTGTGATTGAGACAGCGTATGAGGGTCTGGAGAGGACCGGCTTCTCAGCCGGTAAATCTATTCTTGTTCTGAATGGTTCTGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCATGTTTTTGGCGCTTCGAGAGTCGCTGCCACAGCAAGCACTAGAAATCTGGATCTGCTGAAGAACTTGGGTGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGATTTGCCTGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGCGACCGAGCAGTGAAGGCTGTAAAAGAAGGAGGCAGTGTCGTGGCACTGACCGGTGCCGTGACACCACCCGGCTTCAGATTTGTTGTGACGTCAAATGGAGAAGTTCTGAGGAAACTGAACCCTTATTTGGAGAGTGGGAAGGTAAAGCCAGTTGTGGACCCTAAAGGTCCATTCTCCTTTGCTCAGGTTGCTGATGCCTTCTCTTACCTTGAAACCAATAAAGCAACTGGCAAAGTTGTTATTCATCCAATCCCATGA 1197 0.4762 MSGCASFSSTTSHLRTLPSSLPSTTISPCPSLRFSLTFRENGKQVAPTSTSVQKRNLVSSRSGRFVVKSQATSAPTSSESVQVTPVPSQMKAWIYGEYGGVDVLKFDSNVGVPDFKEDEVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGIVAKVGSQVKDFKVGDEVYGDINEKALEGPKQFGTLAEYTAVEARLLAPKPKNLDFAQAAGLPLVIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKHVFGASRVAATASTRNLDLLKNLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPVVDPKGPFSFAQVADAFSYLETNKATGKVVIHPIP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3527g00033 398 Pfam Zinc-binding dehydrogenase 283 394 - -
Pral3527g00033 398 SUPERFAMILY GroES-like 87 244 IPR011032 -
Pral3527g00033 398 Gene3D - 97 394 - -
Pral3527g00033 398 Gene3D - 231 345 - -
Pral3527g00033 398 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 239 260 IPR002364 GO:0008270|GO:0016491
Pral3527g00033 398 CDD MDR_like_2 90 394 - -
Pral3527g00033 398 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 81 398 IPR044626 GO:0016628
Pral3527g00033 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 212 337 IPR036291 -
Pral3527g00033 398 SMART PKS_ER_names_mod 99 394 IPR020843 GO:0016491
Pral3527g00033 398 MobiDBLite consensus disorder prediction 1 24 - -
Pral3527g00033 398 Pfam Alcohol dehydrogenase GroES-like domain 118 180 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3527g00033 Pral-Chr3527 167255 170061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3527g00033 114 286 Monolignol Biosynthesis Gene Families AT4G39330 25.628 7.05e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3527g00033 K18980 - gmx:100810816 603.979