Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3527g00019 ATGGCTTCACGAAGCTCCAACGTCGATTCTGACTCGAAATCAAGTGGGATATCGTTTTCTTTTAAATTGTCCACCGAGAATACGGCTTCATCGCCTGATTCTCCCTCCTCGTCCAATAGTACGGATTCTACGCCACAAATTTCTCCATCGACCTCGCCTCCGTCGGGTTCTCCGCCTCCTCCGACGAGTTCTCCACCGCCTTCATCAAGCCCGCCTCCATCACGACCGCCACCCTCTTCTTCGCCCCCTCCATCGTCACCGCCTCCATCACCACCACAATCTTCGCCACCTCCACCATCGTCTCCTCCTCCTAAACGGTCACCGCCGCCATCATCTCGGTCACCACCGCCATCGTCTCCTCCTCCTCCTCAACGGTCTCCACCACCGTCGTCTCCTCCCCCAAAGTCACCGTCACCGTCACCGTCACCTCCACCACCATCACAATCCCCACCTCCACCTGATCAATCTTCTCCGCCTCCATCCGCACATCCAACTCCACCTTCATCTCCGCCTTTATCGCAGAACTCGTCTGCACCACTGACACCGGGACCCCCAAATAATTCATCAGCTACCGGCAACGCATCACCACCTCCTTCAAGTACTGTTTCCCCTTCAGTTGCCACTGGCTCACCAAATACACCTAGCTCTGCTCCGCCGCCAAGGACGTGGAGCCCTCCTCCGCTGCCGCACTCACCTTCCACCACAAGCTCAAGCGGTTCTTCGAGTGGATCCATGTCTCTCTCGTCGTCAACAAGTAGCAGCAGCAGTGGTAGTTCAGACAATTACATTGGTTATGCTGTGGCCGGAGTTCTCGGTTTTATCCTGCTCGCGGTGTTGATTGTTTTCGTGGTAAAGAGGAAGAAAAAACAAAAAGTGGCCCATGCTACACATTATGACGCTGCCAATACCTTATATAAGAAACCAGGTAGGGAAGGGTTTTACTATGCCCAGCAGCCTGGGAAAGCGAATTATGCACAAGAGGGTTTTTATACTTCCCAAGCTCCAACTTCTCCCAGCAGTAAAAGTGGGAATCAAGCAGAAGCTGTGCAACATTTTGCGAGTCCAGACTCGCCCTGGAATAATGGTCAGATATCTTTTAGCTATGAGCAGATCACGGAGATAACTCAGAGATTTTCTAGTGAAAATATTATAGGGGAGGGGGGATTTGGTCGTGTGTACAAGGGTTGGCTTTCAGATGGAAAAGAAGTTGCCGTGAAGCAGCTTAAGGCTGGCAGCGGCCAGGGTGAACGGGAATTTAGGGCAGAGGTTGAAATTATAAGCCGAGTTCATCATCGGCATTTGGTATCATTAGTTGGCTATTGCATAGCTGATCACCGAAGAGTGCTTATCTATGAGTTCCTTCCCAATAAAACTCTTGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGGAGAAGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTAGCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCGGCAAACATACTTTTGGATAATGCGTTTGAGGCACAGGTTGCAGACTTTGGACTTGCTAGGCTACATGACGATGATAACACGCACGTATCAACTCGGGTTATGGGGACTTTTGGGTACATGGCTCCAGAGTATGCAACAAGCGGAAAATTGACCGATAGATCAGATGTTTTCTCCTTCGGAGTTGTCCTCCTTGAACTCATAACAGGGAGGAAACCTGTCGATCAGACGCGGCCCGTGGGAGAAGAAAGTTTGGTTGAGTGGGCTCGTCCCCTTCTTCATCGTGCTATTGAGACCCGAGACTTCAGCGAATTAGAGGACGAAAGGCTTAACAAGCAATTTGTGGAGAGCGAGATGTGCAGAATGATTGAAGCTGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCATTGGATAGTCAAGATGAATCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACCATTTATGATGATGGCCACTATAGTGAAGACGCTATTATGAAGTTCAGGAAGATGGCCATTGACAGCTGTAGTGAATCTGAATTTGATAGGGACAGTGGAGATTGCTGTTCTTCAGTAGAGCTTTCTGGACAACAACATTCATGGCTCAAGGGCACTTCAAGCGGGGAGTCAGAGTGCCGGGCTTTCAATGCAAGTAGAAGGACTTAG 2217 0.493 MASRSSNVDSDSKSSGISFSFKLSTENTASSPDSPSSSNSTDSTPQISPSTSPPSGSPPPPTSSPPPSSSPPPSRPPPSSSPPPSSPPPSPPQSSPPPPSSPPPKRSPPPSSRSPPPSSPPPPQRSPPPSSPPPKSPSPSPSPPPPSQSPPPPDQSSPPPSAHPTPPSSPPLSQNSSAPLTPGPPNNSSATGNASPPPSSTVSPSVATGSPNTPSSAPPPRTWSPPPLPHSPSTTSSSGSSSGSMSLSSSTSSSSSGSSDNYIGYAVAGVLGFILLAVLIVFVVKRKKKQKVAHATHYDAANTLYKKPGREGFYYAQQPGKANYAQEGFYTSQAPTSPSSKSGNQAEAVQHFASPDSPWNNGQISFSYEQITEITQRFSSENIIGEGGFGRVYKGWLSDGKEVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCIADHRRVLIYEFLPNKTLEYHLHARGVKVLDWEKRMKIAIGSAKGLAYLHEDCNPKIIHRDIKSANILLDNAFEAQVADFGLARLHDDDNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPVGEESLVEWARPLLHRAIETRDFSELEDERLNKQFVESEMCRMIEAAAACVRHSAPKRPRMVQVVRALDSQDESCDLSNGVKYGQSTIYDDGHYSEDAIMKFRKMAIDSCSESEFDRDSGDCCSSVELSGQQHSWLKGTSSGESECRAFNASRRT 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3527g00019 738 SMART serkin_6 378 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3527g00019 738 Gene3D Phosphorylase Kinase; domain 1 339 453 - -
Pral3527g00019 738 MobiDBLite consensus disorder prediction 24 259 - -
Pral3527g00019 738 SUPERFAMILY Protein kinase-like (PK-like) 359 651 IPR011009 -
Pral3527g00019 738 MobiDBLite consensus disorder prediction 233 259 - -
Pral3527g00019 738 MobiDBLite consensus disorder prediction 213 232 - -
Pral3527g00019 738 PRINTS Proline rich extensin signature 74 91 - -
Pral3527g00019 738 PRINTS Proline rich extensin signature 92 117 - -
Pral3527g00019 738 PRINTS Proline rich extensin signature 33 54 - -
Pral3527g00019 738 PRINTS Proline rich extensin signature 54 70 - -
Pral3527g00019 738 ProSiteProfiles Protein kinase domain profile. 378 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3527g00019 738 MobiDBLite consensus disorder prediction 51 173 - -
Pral3527g00019 738 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 274 694 IPR047117 -
Pral3527g00019 738 MobiDBLite consensus disorder prediction 174 212 - -
Pral3527g00019 738 FunFam Proline-rich receptor-like protein kinase PERK8 350 453 - -
Pral3527g00019 738 CDD STKc_IRAK 384 652 - -
Pral3527g00019 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Pral3527g00019 738 Pfam Protein tyrosine and serine/threonine kinase 381 651 IPR001245 GO:0004672|GO:0006468
Pral3527g00019 738 FunFam proline-rich receptor-like protein kinase PERK8 454 666 - -
Pral3527g00019 738 MobiDBLite consensus disorder prediction 24 50 - -
Pral3527g00019 738 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Pral3527g00019 738 Gene3D Transferase(Phosphotransferase) domain 1 454 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3527g00019 Pral-Chr3527 112082 117073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3527g00019 209 647 Trihelix Transcription Factor Family AT1G68690 50.905 2.16e-142 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral3527g00019 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3527g00019 - - pcin:129322412 860.136