Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3519g00036 ATGGCTTCATATCGCAGCACTTTCTTCTCAATTCTTCTTTCCTTTTCATTAGTCATGTCAACCTTACACACAGCCATTGCTGCTTCATCATCTTCTTCTTCGTCTTCCTCCATCTCCACCAAAACCCTAAATACCTACAAGATTTTCATTAAAGGGTATTGTAGTTCCACCACATACCCTAAAAATTGCTACAAGTTTCTCTCTCCTTATGCCTCTGTGATCAAAACAAGCCCTCTTATTCTCACCAGAGCCTCCATTTATATTGCTCTGAAAGAAACCAGCAAGTCATCTTATGCCCTCAAATCGCTCTCCAAAGTCAAGGATCTCACTCACAACGAAACCCTAGTTATGAAGGACTGTCTCGAGAACGTTTATAGCTCCCTCTACAGAGTCAAGCAATCCGCCATGTCCGTCAAGGGCTTGAACGGCGGTGACAAATCTGGCGACGAGGCGTTCGAGTGGAGTAACATAAAGACGTGGATGAGCGCCGCCATTACGGGTTATACGACCTGCACCGACGGGTTCGGAGAGAAGATCGTGAGAGCTTCCCTGCAGAAGACGATCTCAAGCAGAGTCACAAAAGCTAAAGACTTGGTTAGCAATGCTCTCTCAGTCGTGAACAAGTTCACTTACTAA 636 0.4528 MASYRSTFFSILLSFSLVMSTLHTAIAASSSSSSSSSISTKTLNTYKIFIKGYCSSTTYPKNCYKFLSPYASVIKTSPLILTRASIYIALKETSKSSYALKSLSKVKDLTHNETLVMKDCLENVYSSLYRVKQSAMSVKGLNGGDKSGDEAFEWSNIKTWMSAAITGYTTCTDGFGEKIVRASLQKTISSRVTKAKDLVSNALSVVNKFTY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3519g00036 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 209 IPR035513 -
Pral3519g00036 211 Pfam Plant invertase/pectin methylesterase inhibitor 49 204 IPR006501 GO:0004857
Pral3519g00036 211 SMART PMEI_2 45 205 IPR006501 GO:0004857
Pral3519g00036 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 204 - -
Pral3519g00036 211 NCBIfam pectinesterase inhibitor domain 15 208 IPR006501 GO:0004857
Pral3519g00036 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 209 IPR035513 -
Pral3519g00036 211 CDD PMEI-like_3 54 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3519g00036 Pral-Chr3519 611887 612718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3519g00036 25 210 Carbohydrate Esterase AT1G53830 27.273 1.04e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3519g00036 - - pcin:129314858 270.781