Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3518g00011 ATGAAGGAAGATGAATCTCTTCAACTATTTTCAAACAAAGCATTTAGTGAAGATTATCCTCCTAATGAGGATTATTTAAAGTTATCCGAATTTGTAGTTGAATATGCTGGAGGTCTTCCTTTAGCACTTAAAGCTTTGGGTTCTTTTCTTTGCGGAAGAAGTAAAGCTGAGTGGATAGATGCTTTAGATAGGTTGAAGCAAATTCCTGATAATGATATACTTCAAGTACTTAAAATAAGTTATGATGGACTAACGAATGAGGAAGAAAAGACAATATTTTTAGATATTGCTTGTTTGTTCAAGGGCTGGCAGAAAAAATATGTGACTCAAATTTTGGAAAGTTGTGGTCTTCATGCTACAATTGGAATAAACGTGCTGATTCAAAAAACTTTATTGGTTGAAACAAAAAATTGTAGATTAGAGATGCATGATTTACTTCAAGAGTTGGGTAGGACTATAGTTCAGCAAGAATCTCCCAATGATGTTCGCAAGCGTAGCAGGTTGTGGAAGTTTGAGGACATTAAGGAAGTATTGGAAAATAACGAAGGATCTGAGGCAATAGAAGCTATTGTTATACGAGATCGATATTATCACATGCCAGACAAAATAAAAGTACATCCTGAAGCCTTCTTAAAGATGAGTAATATTAGGCTACTCTTCATAAATCTGATGGGTGACAATCTATTTATCTTCACAAGAGGATTGAAATTTTTTGCTGGTGGATTAAAAGTAGTTCAATGGCCATCATTTCCTTTGGAAGCTCTTCCACTTGAAACTCCATTGTATAAACTTGTTGATATTCAAATGCCTGAAAGTAAAATAAAGCAACTTTGGAATGACATACAGTTTATGACAAAATTGAAATATATCAACTTGAGTTATTCTCATGATTTTACCGAGACTCCAGACTTCTCAGGGGTTCCATATTTAGAACATTTACATCTTAGTGGCTGCAAATCCCTTGTCAAGGTTCATTCCTCACTTGGACAGTTGAAGGGGCTTATTGAGGTGTACTTGGATGGTTGTGGAAACCTTGAAATCCTACCAGAAAAATTGGAAACAAATTCTTTGATGAAGTTTGATCTTAGTGGGTGTAAAAAAGTTGCGGTGCTCCCAGAGTTTGGGGAAGGTATGAAAAAATTATCATATCTTAATGTGAGTGATACTGCTATAACTACACTTCCTGAATCACCTGGAAACAAGTTGTTGAAGACTGGTATAACTCGCCAAATTTCTTGCTTCAATGTAACATCATTAATAGAGCTATATTTAAGCTTGTGTGGCTTAAATGATGGATCGATTCCTGATGGTTTTGGCAATTTATCATCACTCATTGTATTAGATCTGAGAGGTAATCATTTTGTGAATCTACCTACTAATTGCTTTTCTGGTCTTTCTCGACTTCTCTTTCTTTCATTTGATCATTGCACAAGCCTCAAGTCATTGCCAAGGTTTCCACCACAGTAA 1467 0.3531 MKEDESLQLFSNKAFSEDYPPNEDYLKLSEFVVEYAGGLPLALKALGSFLCGRSKAEWIDALDRLKQIPDNDILQVLKISYDGLTNEEEKTIFLDIACLFKGWQKKYVTQILESCGLHATIGINVLIQKTLLVETKNCRLEMHDLLQELGRTIVQQESPNDVRKRSRLWKFEDIKEVLENNEGSEAIEAIVIRDRYYHMPDKIKVHPEAFLKMSNIRLLFINLMGDNLFIFTRGLKFFAGGLKVVQWPSFPLEALPLETPLYKLVDIQMPESKIKQLWNDIQFMTKLKYINLSYSHDFTETPDFSGVPYLEHLHLSGCKSLVKVHSSLGQLKGLIEVYLDGCGNLEILPEKLETNSLMKFDLSGCKKVAVLPEFGEGMKKLSYLNVSDTAITTLPESPGNKLLKTGITRQISCFNVTSLIELYLSLCGLNDGSIPDGFGNLSSLIVLDLRGNHFVNLPTNCFSGLSRLLFLSFDHCTSLKSLPRFPPQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3518g00011 488 SUPERFAMILY L domain-like 142 483 - -
Pral3518g00011 488 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 484 IPR044974 GO:0006952
Pral3518g00011 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 96 IPR027417 -
Pral3518g00011 488 Pfam Leucine Rich Repeat 443 465 IPR001611 GO:0005515
Pral3518g00011 488 Gene3D Ribonuclease Inhibitor 374 485 IPR032675 -
Pral3518g00011 488 SMART LRR_typ_2 441 464 IPR003591 -
Pral3518g00011 488 SMART LRR_typ_2 378 401 IPR003591 -
Pral3518g00011 488 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 85 - -
Pral3518g00011 488 PRINTS Disease resistance protein signature 36 50 - -
Pral3518g00011 488 PRINTS Disease resistance protein signature 439 455 - -
Pral3518g00011 488 Gene3D Ribonuclease Inhibitor 199 373 IPR032675 -
Pral3518g00011 488 Pfam NB-ARC domain 2 67 IPR002182 GO:0043531
Pral3518g00011 488 Gene3D - 1 85 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3518g00011 Pral-Chr3518 137218 138914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3518g00011 1 482 WRKY Transcription Factor Family AT5G45050 31.801 3.74e-50 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3518g00011 - - pcin:129303275 552.747