Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3500g00020 ATGGAAGCCCATTCTTCTCCCTCAACGACGTCGTTTTATCACCAGAAACGTTTCCTGCAGGAGATGGATTTCTTCTCTGACAAAAAAATCAAGACTGATGATTATCAACATGATCATGATGATGATCTGATGATGCTAAACGGGCCCACAGAGCTTCACGCTGATGCGAGTTTAGATCTTGTGACTGTGACGAGCAGTAGCAACAGATCGATGGTGGATGATGGGGCATCATACGCCATGGAAGAGAACAAGAAAAAAGAGGTAGAAGAAGGCAGTGGAGATCAGATTGAGAGGAAAAGAGGAATGAATATGACAGGGCTATTAGTTGAAGATAGTAATAAAAGTGAAGGCAAATTGAGAGAAAGCAAAAGCAATAATAATATGCTTGATTTGATGGAATGCAAGATTGAGAAGAGCACAAATAATAATGATCATCAGCCACTTAACAAAGGTTATGGGAACGATCATCATAATAGTGATCATACAAAAAGCATTTCATCAGAAACCATATCACTCGTCAGGAAAGCTCGTGTTTCTGTTCGAGCTCGATCTGAGACTCCAATGATAGCAGATGGATGCCAATGGAGAAAATATGGGCAAAAGATGGCAAAAGGAAACCCTTGTCCCCGAGCTTATTATCGTTGTTCCATGGGAACTGCTTGTCCTGTACGAAAACAAGTTCAGAGGTGTGCCGAAGATAGAAGCATTCTGATGACTACATACGAAGGACAACACAATCATCCACTTCCTCCAGCCGCAAAAGCTATGGCTTCCACAACATCTTCAGCTGTTTCAACCATTCTTTCAGGATCAATTCAAAGTTCAGATCATCCTCATCATCACAATAACCTCATAAACCCTAATCTTTTAGGAAGTGCTTCAATGTTTGCTTACTCACACAACATGGCTACTCTAACAGCCTCAGCTCCATTCCCCACTATAATTTTGGATCTCACTGATCATCAAACGGAGCCGCCGCCGCCCAAGATTTTCGGTAAGGCTCTGGGTGATCAACACCCGAGGGTCTCTCAGGGAACGACGTCGTTCACTGATACGGTGAATGCAGCAACGGCAGCTATTACAGCGGATCCCAATTTCACTGCAGCTCTTGTGGCTGCTATCACTTCTATCATTGGAAGTTCCCATTCCAAGAGTAATAATGGTTCAGATGTTACTACAAATGGAAAACCCTAG 1194 0.4288 MEAHSSPSTTSFYHQKRFLQEMDFFSDKKIKTDDYQHDHDDDLMMLNGPTELHADASLDLVTVTSSSNRSMVDDGASYAMEENKKKEVEEGSGDQIERKRGMNMTGLLVEDSNKSEGKLRESKSNNNMLDLMECKIEKSTNNNDHQPLNKGYGNDHHNSDHTKSISSETISLVRKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQVQRCAEDRSILMTTYEGQHNHPLPPAAKAMASTTSSAVSTILSGSIQSSDHPHHHNNLINPNLLGSASMFAYSHNMATLTASAPFPTIILDLTDHQTEPPPPKIFGKALGDQHPRVSQGTTSFTDTVNAATAAITADPNFTAALVAAITSIIGSSHSKSNNGSDVTTNGKP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3500g00020 397 Gene3D WRKY domain 174 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00020 397 Pfam WRKY DNA -binding domain 191 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00020 397 SUPERFAMILY WRKY DNA-binding domain 182 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00020 397 FunFam probable WRKY transcription factor 31 174 251 - -
Pral3500g00020 397 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 88 387 IPR044810 GO:0003700
Pral3500g00020 397 SMART WRKY_cls 189 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00020 397 ProSiteProfiles WRKY domain profile. 184 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00020 397 MobiDBLite consensus disorder prediction 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3500g00020 Pral-Chr3500 714501 726083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3500g00020 151 378 WRKY Transcription Factor Family AT4G04450 51.562 2.48e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3500g00020 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3500g00020 - - pcin:129303865 466.077