Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3500g00019 ATGGAAGCCCATTCTTCTCCCTCAACGACGTCGTTTTATCACCAGAAACGTTTCCTGCAGGAGATGGATTTCTTCTCTGACAAAAAAATCAAGACTGATGATTATCAACATGATCATGATGATGATCTGATGATGCTAAACGGGCCCACAGAGCTTCACGCTGATGCGAGTTTAGATCTTGTGACTGTGACGAGCAGTAGCAACAGATCGATGGTGGATGATGGGGCATCATACGCCATGGAAGAGAACAAGAAAAAAGAGTATGTAGCTTTGTTAGCTGAATTGCAGCAGATAAAAGCTGAAAATCAACGTCTGAGAGATTTGCTTGATCAAGTGAACCTAAACTACAATGCCCTGAAATTGAAACTTACCAAGCTCAAGCGGACGCAAAGTAATAATGAGGTAGAAGAAGGCAGTGGAGATCAGATTGAGAGGAAAAGAGGAATGAATATGACAGGGCTATTAGTTGAAGATAGTAATAAAAGTGAAGGCAAATTGAGAGAAAGCAAAAGCAATAATAATATGCTTGATTTGATGGAATGCAAGATTGAGAAGAGCACAAATAATAATGATCATCAGCCACTTAACAAAGGTTATGGGAACGATCATCATAATAGTGATCATACAAAAAGCATTTCATCAGAAACCATATCACTCGTCAGGAAAGCTCGTGTTTCTGTTCGAGCTCGATCTGAGACTCCAATGATAGCAGATGGATGCCAATGGAGAAAATATGGGCAAAAGATGGCAAAAGGAAACCCTTGTCCCCGAGCTTATTATCGTTGTTCCATGGGAACTGCTTGTCCTGTACGAAAACAAGTTCAGAGGTGTGCCGAAGATAGAAGCATTCTGATGACTACATACGAAGGACAACACAATCATCCACTTCCTCCAGCCGCAAAAGCTATGGCTTCCACAACATCTTCAGCTGTTTCAACCATTCTTTCAGGATCAATTCAAAGTTCAGATCATCCTCATCATCACAATAACCTCATAAACCCTAATCTTTTAGGAAGTGCTTCAATGTTTGCTTACTCACACAACATGGCTACTCTAACAGCCTCAGCTCCATTCCCCACTATAATTTTGGATCTCACTGATCATCAAACGGAGCCGCCGCCGCCCAAGATTTTCGGTAAGGCTCTGGGTGATCAACACCCGAGGGTCTCTCAGGGAACGACGTCGTTCACTGATACGGTGAATGCAGCAACGGCAGCTATTACAGCGGATCCCAATTTCACTGCAGCTCTTGTGGCTGCTATCACTTCTATCATTGGAAGTTCCCATTCCAAGAGTAATAATGGTTCAGATGTTACTACAAATGGAAAACCCTAG 1335 0.424 MEAHSSPSTTSFYHQKRFLQEMDFFSDKKIKTDDYQHDHDDDLMMLNGPTELHADASLDLVTVTSSSNRSMVDDGASYAMEENKKKEYVALLAELQQIKAENQRLRDLLDQVNLNYNALKLKLTKLKRTQSNNEVEEGSGDQIERKRGMNMTGLLVEDSNKSEGKLRESKSNNNMLDLMECKIEKSTNNNDHQPLNKGYGNDHHNSDHTKSISSETISLVRKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQVQRCAEDRSILMTTYEGQHNHPLPPAAKAMASTTSSAVSTILSGSIQSSDHPHHHNNLINPNLLGSASMFAYSHNMATLTASAPFPTIILDLTDHQTEPPPPKIFGKALGDQHPRVSQGTTSFTDTVNAATAAITADPNFTAALVAAITSIIGSSHSKSNNGSDVTTNGKP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3500g00019 444 MobiDBLite consensus disorder prediction 130 144 - -
Pral3500g00019 444 MobiDBLite consensus disorder prediction 130 171 - -
Pral3500g00019 444 MobiDBLite consensus disorder prediction 187 214 - -
Pral3500g00019 444 FunFam probable WRKY transcription factor 31 221 298 - -
Pral3500g00019 444 Gene3D WRKY domain 221 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00019 444 Pfam WRKY DNA -binding domain 238 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00019 444 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 63 434 IPR044810 GO:0003700
Pral3500g00019 444 SUPERFAMILY WRKY DNA-binding domain 229 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00019 444 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00019 444 Coils Coil 78 129 - -
Pral3500g00019 444 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3500g00019 Pral-Chr3500 714501 726083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3500g00019 21 429 WRKY Transcription Factor Family AT1G62300 40.833 1.70e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3500g00019 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3500g00019 - - pcin:129303865 529.635