Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3500g00018 ATGGAAGCCCATTCTTCTCCCTCAACGACGTCGTTTTATCACCAGAAACGTTTCCTGCAGGAGATGGATTTCTTCTCTGACAAAAAAATCAAGACTGATGATTATCAACATGATCATGATGATGATCTGATGATGCTAAACGGGCCCACAGAGCTTCACGCTGATGCGAGTTTAGATCTTGTGACTGTGACGAGCAGTAGCAACAGATCGATGGTGGATGATGGGGCATCATACGCCATGGAAGAGAACAAGAAAAAAGAGTATGTAGCTTTGTTAGCTGAATTGCAGCAGATAAAAGCTGAAAATCAACGTCTGAGAGATTTGCTTGATCAAGTGAACCTAAACTACAATGCCCTGAAATTGAAACTTACCAAGCTCAAGCGGACGCAAAGTAATAATGAGATAGCAGATGGATGCCAATGGAGAAAATATGGGCAAAAGATGGCAAAAGGAAACCCTTGTCCCCGAGCTTATTATCGTTGTTCCATGGGAACTGCTTGTCCTGTACGAAAACAAGTTCAGAGGTGTGCCGAAGATAGAAGCATTCTGATGACTACATACGAAGGACAACACAATCATCCACTTCCTCCAGCCGCAAAAGCTATGGCTTCCACAACATCTTCAGCTGTTTCAACCATTCTTTCAGGATCAATTCAAAGTTCAGATCATCCTCATCATCACAATAACCTCATAAACCCTAATCTTTTAGGAAGTGCTTCAATGTTTGCTTACTCACACAACATGGCTACTCTAACAGCCTCAGCTCCATTCCCCACTATAATTTTGGATCTCACTGATCATCAAACGGAGCCGCCGCCGCCCAAGATTTTCGGTAAGGCTCTGGGTGATCAACACCCGAGGGTCTCTCAGGGAACGACGTCGTTCACTGATACGGTGAATGCAGCAACGGCAGCTATTACAGCGGATCCCAATTTCACTGCAGCTCTTGTGGCTGCTATCACTTCTATCATTGGAAGTTCCCATTCCAAGAGTAATAATGGTTCAGATGTTACTACAAATGGAAAACCCTAG 1032 0.4399 MEAHSSPSTTSFYHQKRFLQEMDFFSDKKIKTDDYQHDHDDDLMMLNGPTELHADASLDLVTVTSSSNRSMVDDGASYAMEENKKKEYVALLAELQQIKAENQRLRDLLDQVNLNYNALKLKLTKLKRTQSNNEIADGCQWRKYGQKMAKGNPCPRAYYRCSMGTACPVRKQVQRCAEDRSILMTTYEGQHNHPLPPAAKAMASTTSSAVSTILSGSIQSSDHPHHHNNLINPNLLGSASMFAYSHNMATLTASAPFPTIILDLTDHQTEPPPPKIFGKALGDQHPRVSQGTTSFTDTVNAATAAITADPNFTAALVAAITSIIGSSHSKSNNGSDVTTNGKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3500g00018 343 Pfam WRKY DNA -binding domain 137 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00018 343 Gene3D WRKY domain 122 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00018 343 SUPERFAMILY WRKY DNA-binding domain 132 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3500g00018 343 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00018 343 Coils Coil 78 129 - -
Pral3500g00018 343 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3500g00018 343 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 63 127 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3500g00018 Pral-Chr3500 714499 726083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3500g00018 135 324 WRKY Transcription Factor Family AT4G04450 52.294 1.37e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3500g00018 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3500g00018 - - pcin:129303865 318.161