Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral34g00009 | ATGGCAAAGAAGAAGAATCCCCGGGTTTATATGGATGTCTCTGTAGATAAGGTGTATGTTGGAAGGATGATTTTTGAGCTATTCGAAGATGTTGCCCCTGCAACCACAGAAAATTTCCGTGCTTTATGTACTGGTGAGAAGGGAATTGGGCCAAAAACAGGTTTGCCCCTACATTACAAGGGTTCTTTCTTCTATCGGTTTCGGAGGGATATCTCCTATGTGAAGGGCGGGGATTTGGGCGGTCGGAATGGTACTTGTGGGGAAAGCATCTATGGTGTAAATTTCCCGAGTGAGAATGCCAATAATATCCATATGAGACGCCTATACTTAAACATGATGAACGAGGACTTCTTACCATGA | 360 | 0.4389 | MAKKKNPRVYMDVSVDKVYVGRMIFELFEDVAPATTENFRALCTGEKGIGPKTGLPLHYKGSFFYRFRRDISYVKGGDLGGRNGTCGESIYGVNFPSENANNIHMRRLYLNMMNEDFLP | 119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral34g00009 | 119 | SUPERFAMILY | Cyclophilin-like | 4 | 115 | IPR029000 | - | |
| Pral34g00009 | 119 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 8 | 115 | - | - | |
| Pral34g00009 | 119 | Gene3D | - | 1 | 117 | IPR029000 | - | |
| Pral34g00009 | 119 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 119 | IPR002130 | GO:0000413|GO:0003755 | |
| Pral34g00009 | 119 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 11 | 115 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral34g00009 | Pral-Chr34 | 53403 | 55844 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral34g00009 | 4 | 114 | U-box Gene Family | AT5G67530 | 34.821 | 2.89e-07 | 45.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral34g00009 | K09566 | - | qsa:O6P43_015666 | 136.732 |