Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3493g00029 ATGGGAGGTACACCACCTGCGACATTGATAGAATTTTCTCTAGGCCAAGTCCAAGGGCAAGATATTTATGATGTGAGCTTGGTAGATGGATTCAATGTTCCTGTAGCAGTTGTTCCTCACGGTGGTTGTGGAGAATGCAAGAGCACATATTGTCTGGCAGATATGATCAGCCTATGCCCTTCAGAGCTGAGGGTAACGAGCAAAGATGGAAAAGTTGTGGCGTGCAAGGGCGCTTGTATGGCAGATGGCTCATCATCATCACAATCCTGTGGCAGCAATCCTTCCAAGCCCTCAGCTTCTGCAGAACTATTCAAGAGTGTTTGCCAACGTGCCTATAGCTATCCAGAAGATTATAATCAAAGCAATTTCAGATGTAAAGGCGCAGATTATAATATCACCTTCTGTGAATCCCCCTACACAAATTTGGACACATCTGGCTCCTCATCATGCACGGAAACCATCACAACATCTCATTACATCAAGGATCCAAATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCACTCCTGAAAATTCTACAAATCGCTATGTGGGAATTTGGTACATGTCCAATTCCACTATTGTATGGGTAGCTAACAGAAATCGACCATTAAGGGATACTTCAGGAATTGTTAAGGTATCTGAAGATGGCAATCTTGTCATATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTGTCAAATATTTCATCTACTACTAGTTTTGAGATTTTAGATTCTGGAAACCTTGTCCTAATTGATAACTTGACGAAAACTATATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCAAAGCATGAAAATTACCAGCAACAAAAGAACAGGGGAGAAACGAAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCACTCGGCAATTTCTCTATGAGCCTAGAACAACTAAATTTTGCAGAACTGTTCATATGGAATGCAACTAGCCCCTACTGGCGTAGTGGTCCATGGAATGGCCAAGGCCTTACAACAGTTCTCAGGATGAGTTCTGAGTATGATAATGGTGCTGAAGAGATGGTTTTTAGCCTCTCAAATGGGTCTGACATCAAAGAGATGGTTGTTTTGAATGCAAAAGGAAAGTTATTACATAAACAATGGGATGATACTGAGAGGAGATGGCTAGAAACAAATCTTGTTCAAAATTCAGATTGTGATGTCTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGTACGCCAAAGTGCAGTTGTTTGAATGGGTTTGAACCAAGAAATGGGGAGGAATGGAATAGACAAAATTGGGCAGGTGGTTGTGTTAGGAAATCAACTCTGCCATGTGAGAAAATGAAAAATGGCAGTTCTAATGGAAAGGAAGATACGTTTTTCCATCTGCAAAATGTTAAAGCACCAAACTTTGGAGAACAATCATCTAATACAGAAGACGATTGTAGATTACAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTAATTGACGTACAACAATTCTCAAATGGAGGAGTTGACCTATACATTCGTGCAGCCAATTCAGATTTTGCTAAGAAGAGACATAGGACATTCATCATTATCATTGTTGCAGTAATAGCAACTATTATTATCAGTGTCAGTTGTGCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGCAGGAAAACGAAATAGCATACAGTTCTTGTCAAAAAAGCGTGGTGCAAATGTAGACAAAACAAGGGGCAATATTATTGGAAACTTGTCACAAGTTAAATTCCAGGAGTTATTGATCTATGATTTTGAAAAGGTTGCAACTGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGAGGTTTTGGTCCAGTCTATAAGGGAACACTGCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTGGACAAGGACAAGAAGAATTCATGAATGAGATGATTGTCATTTCCAGGCTTCAACATCGTAATCTTGTAAAACTTTTAGGTTGCTGTATTGAAGAAGAAGAAAAGATGTTGATCTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATATTTGATCCAGAAAAACGTAAACTTCTAGACTGGGGAAAGCGCTTTGTCATAATTGAAGGAGTAGCAAGAGGAGTACTTTATCTTCATAAGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACCTGATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTCAAAGGAAGTGAAGATCATGCTAACACAAGGAGAGTTGTGGGAACCTAG 2385 0.3887 MGGTPPATLIEFSLGQVQGQDIYDVSLVDGFNVPVAVVPHGGCGECKSTYCLADMISLCPSELRVTSKDGKVVACKGACMADGSSSSQSCGSNPSKPSASAELFKSVCQRAYSYPEDYNQSNFRCKGADYNITFCESPYTNLDTSGSSSCTETITTSHYIKDPNTISSKGGLFTLGFFTPENSTNRYVGIWYMSNSTIVWVANRNRPLRDTSGIVKVSEDGNLVILDGQNQTIWSSNVSNISSTTSFEILDSGNLVLIDNLTKTIWQSFEHPSDTLLQSMKITSNKRTGEKRKLTAWKNQSDPSLGNFSMSLEQLNFAELFIWNATSPYWRSGPWNGQGLTTVLRMSSEYDNGAEEMVFSLSNGSDIKEMVVLNAKGKLLHKQWDDTERRWLETNLVQNSDCDVYGICGEFGICNSKSTPKCSCLNGFEPRNGEEWNRQNWAGGCVRKSTLPCEKMKNGSSNGKEDTFFHLQNVKAPNFGEQSSNTEDDCRLQCLENCTCKAYSYNSVLGCMTWKENLIDVQQFSNGGVDLYIRAANSDFAKKRHRTFIIIIVAVIATIIISVSCACFLWKWKAKHSAGKRNSIQFLSKKRGANVDKTRGNIIGNLSQVKFQELLIYDFEKVATATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMIVISRLQHRNLVKLLGCCIEEEEKMLIYEYMPNKSLDAFIFDPEKRKLLDWGKRFVIIEGVARGVLYLHKDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKGSEDHANTRRVVGT 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3493g00029 794 ProSiteProfiles Bulb-type lectin domain profile. 151 270 IPR001480 -
Pral3493g00029 794 Pfam Protein tyrosine and serine/threonine kinase 630 783 IPR001245 GO:0004672|GO:0006468
Pral3493g00029 794 SUPERFAMILY Osmotin, thaumatin-like protein 2 135 IPR037176 -
Pral3493g00029 794 ProSiteProfiles Thaumatin family profile. 1 135 IPR001938 -
Pral3493g00029 794 FunFam receptor-like serine/threonine-protein kinase SD1-8 604 704 - -
Pral3493g00029 794 SMART tha2 2 136 IPR001938 -
Pral3493g00029 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 188 337 IPR036426 -
Pral3493g00029 794 CDD B_lectin 157 272 IPR001480 -
Pral3493g00029 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 147 269 - -
Pral3493g00029 794 Pfam Thaumatin family 2 135 IPR001938 -
Pral3493g00029 794 Pfam PAN-like domain 463 521 IPR003609 -
Pral3493g00029 794 ProSiteProfiles PAN/Apple domain profile. 453 536 IPR003609 -
Pral3493g00029 794 SUPERFAMILY Hairpin loop containing domain-like 479 532 - -
Pral3493g00029 794 Gene3D Transferase(Phosphotransferase) domain 1 705 794 - -
Pral3493g00029 794 SUPERFAMILY Protein kinase-like (PK-like) 612 794 IPR011009 -
Pral3493g00029 794 ProSiteProfiles Protein kinase domain profile. 629 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00029 794 SMART serkin_6 629 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00029 794 CDD PAN_AP_plant 458 534 - -
Pral3493g00029 794 SMART ntp_6 463 535 IPR003609 -
Pral3493g00029 794 SMART blect_4 157 272 IPR001480 -
Pral3493g00029 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 705 794 - -
Pral3493g00029 794 PIRSF SRK 132 794 IPR024171 GO:0004674
Pral3493g00029 794 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 149 784 - -
Pral3493g00029 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Pral3493g00029 794 Pfam D-mannose binding lectin 197 298 IPR001480 -
Pral3493g00029 794 Gene3D Thaumatin 1 135 IPR037176 -
Pral3493g00029 794 Gene3D Phosphorylase Kinase; domain 1 592 704 - -
Pral3493g00029 794 Pfam S-locus glycoprotein domain 330 431 IPR000858 GO:0048544
Pral3493g00029 794 Gene3D - 146 270 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3493g00029 Pral-Chr3493 1000837 1003778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3493g00029 549 794 Receptor kinase-like Gene Family AT4G04500 53.659 1.70e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3493g00029 PK_Tyr_Ser-Thr 4.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3493g00029 - - pcin:129286414 800.045