Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3493g00008 ATGGAGGAGAAGAAAGAGGAGACCCCGACAAATGAACTGCGGTACCGCGGGGTCCAGCAGCGGCCCTGGGGGAAGTTTGCAGCGGAGATAAGGGACCCGACGAAGCAAGGTGCAAGGCTGTGGCTTGGGACATTTGAGACAGCTGAGGAAGCAGCAAGAGCATATGACGAAGCAGCTTACAACTTCAGGGGTCATCTTGCAGTTCTTAATTTCCCCCAACACTACAATCTTCCTCCTCCTCCGCCATATCACCCATTCTCTTCCTCTTCTTTTTCTCCTCCTCCTCCTCCTCCTCTTCTTGCTTATGGAGCTACTAATGACCATGCAGCTTCCTCAACTGCTGGACAGGACGCCCAGAGGGAAGTTATTGAGTTTGAGTGCCTGGATGATAAGGTGTTGGTAGAGCTTCTTGAGTCTCAAGAGAAGAACATCAAACAAGATTGA 444 0.509 MEEKKEETPTNELRYRGVQQRPWGKFAAEIRDPTKQGARLWLGTFETAEEAARAYDEAAYNFRGHLAVLNFPQHYNLPPPPPYHPFSSSSFSPPPPPPLLAYGATNDHAASSTAGQDAQREVIEFECLDDKVLVELLESQEKNIKQD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3493g00008 147 PANTHER DNA-BINDING DOMAIN 5 138 IPR044808 GO:0003700|GO:0009873
Pral3493g00008 147 MobiDBLite consensus disorder prediction 85 101 - -
Pral3493g00008 147 MobiDBLite consensus disorder prediction 85 117 - -
Pral3493g00008 147 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Pral3493g00008 147 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Pral3493g00008 147 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Pral3493g00008 147 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pral3493g00008 147 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Pral3493g00008 147 FunFam Ethylene-responsive transcription factor 2 14 73 - -
Pral3493g00008 147 Gene3D AP2/ERF domain 13 74 IPR036955 GO:0003700|GO:0006355
Pral3493g00008 147 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Pral3493g00008 147 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3493g00008 Pral-Chr3493 511816 512259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3493g00008 14 142 AP2-EREBP Transcription Factor Family AT3G23230 56.589 8.29e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3493g00008 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3493g00008 - - aew:130765929 142.51