Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3493g00002 ATGGCCCAACATAACGTTTTCATATTCTTTCTATTTCCTCTCCCTTGCTTAGTCTTTTTGTCACTGTGCTCCATCACTTCAGGACTTACGGAAATTGAAGCTCTTCTCAAGTGGAAACGAAGTCTCCCGAACCAACCAATTTTGGATTCATGGGTCTCTCCACCACTAGCTAACTCCAGTAGAGCTCAAATCCCATGTTCATGGCGTGGAATTAGTTGTGATTCTTTAGGGAGCGTGATTGAATTAAACTTGAACAACACTGGTCTTCAAGGTAAGATTGAAAGCTTGAACTTCTCAGCGTTACCAAATCTTCTTATTCTCAATCTTCAATCTAACAAACTCACTGGCAATATACCAGAAAGCATTGGAGTGCTCTCAAAGCTCCAATTTCTATCTCTAGATAAAAACAACTTTTCTGGGTTTATACCCCAATCTCTAGGTAACTGTACACATCTAAGTGTTCTCTCAGTGGCTTTAAACAATCTCTCGGGCATAATTCCACCTAGTATTGGCAGATTGACCAATCTAACTGATGTTCGCTTTCATCATAACAATTTACATGGTGATTTGCCGCAAGAGCTTGGAAATGTTTCATCTTTGATAGTTGTTCATCTATCCTACAACAACTTCAGTGGCCATTTACCACCTCAAGTGTGCAAAGGTGGTAAGCTTGTGAATTTCACTGCAGCCTATAATAGTCTCTCTGGTCCAATACCAATAAGTTTGAGAAACTGTTCATCTTTATACAGAGTTCAGATTCAACATAACCAGTTGACAGGTTATGCAAATCAGGATTTTGGAGTTTATCCAAATCTCACTTACATTGACATTAGTCTCAACAGAGTGCAAGGCGAGCTCTCTGCAAATTGGGGTGCCTGCCAAAGCTTAGAAGCACTTATCGTGGCTGGCAATTCAATCAAGGGAAATATTCCTGGTGAGGTGTTTCAATTGAAACAACTACAAAAGCTTGACTTGTCATCGAACCAAATATCCGGCGAGATTCCAACAGAAATCAGGAATGCCTCGATGTTATACCTTCTAAACTTAAATAGAAACAATATTTCAGGTATGATGCCTGCAAGCATTGGAAGTCTTTCTAATTTGGAGTCATTAGACCTGTCAATGAATAGGCTGAGTGGACCCATTGCTTATCAATTAGGGAATTGCTACAGGCTACTCAATTTAAATTTGAGTCATAATGACTTCAATGGACGAATCCCAAATCAAATAGGGAATCTTTACTCCTTAGAAGATTTTCTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTATTGATCTTAGTAAATTCAACAACTTGATAAGTCTGAATCTGTCTCATAATAATTTATCAGGTTCTATCCCTGATTCTCTTAGGACAATGTTGAGCTTGTCAAGCATCATCCTCTCTTACAACGATTTGGAGGGTCCTGTACCTAACGGTGGCATATTTAATAGTTCTTATCAATTAGATCTGAGTAATAACAAAGATCTATGTGGGAGAATCCAAGGTTTGAGACCTTGCAATATTTCAGCATCACACGGGGGAAGCAGCAAGGGCAAAGTTGTGATATCTATTGTTGCTTCTTTAGCAGGTGTACTACTTATTTCATTGGTGTTAGTTGGGATTTTTGTTATTTGCTCAGAAAGAAACTCAAGAATTTTAGAACAGAATTCAGGAATCAAGAAGGAAAGCACATTTTCAATTTTACATTTTGATGGGAAAAATCTGTATGATGACATAATTGAAGCAACTGAGAACTTTGATGACAAGTATTGTATAGGGGAAGGGGCTTGTGGAAAAGTTTACAAAATGGTCATGCAAGGGGGTGAACAATTTGCTATAAAGAAGTTTAGGTGTGAAGAAGATGACTTAGACATTGAAAGTTTAAAAGCCTTCAAGAGTGAGATTGAAGCCATGACAGAAATCCGCCATCGAAACATTGTGAAGCTCTATGGATTTTGCTCACAAAGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGAGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAAAGTTAGATTGGCTTGTGAGGGTGGATATTGTCAAAGGTGTAGCACAAGCTTTATCATATATGCATCATGATCTTGATCTACCAATTATTCATAGAGACATATCAAGCAAAAATATATTATTATCTGCAAATCTTGAAGCCCATATCTCAGACTTTGGCACAGCAAGGTTCTTGAAGCTCAACTCATCAATTTGGACAGCGTTTGCTGGCACACGTGGCTATGCTGCTCCAGAGCTAGCATACACAATGGCAGTGTCTGAGAAATGTGATGTGTTTAGCTTTGGAGTGTTGGCTTTTGAAATTCTCATGGGAAAGCATCCTGGTGATCTAATTTCTCATTTACAATCCTTTGATGATGTTCCAAATATGAACTTCAAAGAGATTCTAGACCCACGTCTATCACCTCCCAAAGAGCAGCAAAAGTTGATGAAGGAAGTGGTTTTGATTGCAAGTATTGCTATTTCATGTTTACAAACCAACCCTTCATCTCGACCAACCATGCGAAGCATTGCTGATCAGATGATTTCAAGTTTATGTTAG 2595 0.3846 MAQHNVFIFFLFPLPCLVFLSLCSITSGLTEIEALLKWKRSLPNQPILDSWVSPPLANSSRAQIPCSWRGISCDSLGSVIELNLNNTGLQGKIESLNFSALPNLLILNLQSNKLTGNIPESIGVLSKLQFLSLDKNNFSGFIPQSLGNCTHLSVLSVALNNLSGIIPPSIGRLTNLTDVRFHHNNLHGDLPQELGNVSSLIVVHLSYNNFSGHLPPQVCKGGKLVNFTAAYNSLSGPIPISLRNCSSLYRVQIQHNQLTGYANQDFGVYPNLTYIDISLNRVQGELSANWGACQSLEALIVAGNSIKGNIPGEVFQLKQLQKLDLSSNQISGEIPTEIRNASMLYLLNLNRNNISGMMPASIGSLSNLESLDLSMNRLSGPIAYQLGNCYRLLNLNLSHNDFNGRIPNQIGNLYSLEDFLDLSFNSLSGEIPIDLSKFNNLISLNLSHNNLSGSIPDSLRTMLSLSSIILSYNDLEGPVPNGGIFNSSYQLDLSNNKDLCGRIQGLRPCNISASHGGSSKGKVVISIVASLAGVLLISLVLVGIFVICSERNSRILEQNSGIKKESTFSILHFDGKNLYDDIIEATENFDDKYCIGEGACGKVYKMVMQGGEQFAIKKFRCEEDDLDIESLKAFKSEIEAMTEIRHRNIVKLYGFCSQRSHTFAVYEYMEGGTLADFLKNDTKALKLDWLVRVDIVKGVAQALSYMHHDLDLPIIHRDISSKNILLSANLEAHISDFGTARFLKLNSSIWTAFAGTRGYAAPELAYTMAVSEKCDVFSFGVLAFEILMGKHPGDLISHLQSFDDVPNMNFKEILDPRLSPPKEQQKLMKEVVLIASIAISCLQTNPSSRPTMRSIADQMISSLC 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3493g00002 864 ProSitePatterns Tyrosine protein kinases specific active-site signature. 714 726 IPR008266 GO:0004672|GO:0006468
Pral3493g00002 864 Gene3D Transferase(Phosphotransferase) domain 1 669 863 - -
Pral3493g00002 864 FunFam Leucine-rich repeat receptor protein kinase MSP1 551 668 - -
Pral3493g00002 864 FunFam Nuclear pore complex protein NUP107 29 189 - -
Pral3493g00002 864 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Pral3493g00002 864 SUPERFAMILY RNI-like 160 499 - -
Pral3493g00002 864 ProSiteProfiles Protein kinase domain profile. 589 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00002 864 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Pral3493g00002 864 ProSiteProfiles Leucine-rich repeat profile. 440 462 IPR001611 GO:0005515
Pral3493g00002 864 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 197 513 - -
Pral3493g00002 864 SUPERFAMILY L domain-like 76 190 - -
Pral3493g00002 864 Pfam Protein kinase domain 592 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00002 864 Gene3D Ribonuclease Inhibitor 199 512 IPR032675 -
Pral3493g00002 864 SUPERFAMILY Protein kinase-like (PK-like) 569 857 IPR011009 -
Pral3493g00002 864 ProSiteProfiles Leucine-rich repeat profile. 319 341 IPR001611 GO:0005515
Pral3493g00002 864 FunFam MDIS1-interacting receptor like kinase 2 669 863 - -
Pral3493g00002 864 SMART LRR_typ_2 197 221 IPR003591 -
Pral3493g00002 864 SMART LRR_typ_2 125 149 IPR003591 -
Pral3493g00002 864 SMART LRR_typ_2 438 462 IPR003591 -
Pral3493g00002 864 SMART LRR_typ_2 101 123 IPR003591 -
Pral3493g00002 864 SMART LRR_typ_2 365 389 IPR003591 -
Pral3493g00002 864 SMART LRR_typ_2 317 341 IPR003591 -
Pral3493g00002 864 Gene3D Phosphorylase Kinase; domain 1 547 668 - -
Pral3493g00002 864 PANTHER LEUCINE RICH REPEAT KINASE 2 146 860 - -
Pral3493g00002 864 PRINTS Leucine-rich repeat signature 320 333 - -
Pral3493g00002 864 PRINTS Leucine-rich repeat signature 365 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3493g00002 Pral-Chr3493 72963 75811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3493g00002 81 762 Receptor kinase-like Gene Family AT4G08850 45.506 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3493g00002 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3493g00002 - - gmx:100814345 992.26