Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3493g00001 ATGGCTTTAAACAATCTCTCAGGCATAATTCCACCTAGTATTGGTAGATTGACCAATCTAACTGATGTTCGCTTTCATCGCAACCATTTACATGGCGATTTGCCACAAGAGTTTGGAAATGTTTCGTCTTTGATTGTTGTTCATCTGTCATATAACAACTTCAGTGGCCATCTACCACCTCAAGTGTGCAGAGGCGGTAAGCTTGTGAATTTCACTGCAGCTTATAATAGTCTCTCTGGTCCAATCCCAATGAGTTTGAGAAACTGTTCATCTCTTTATAGAGTTCAACTTCAACATAACCAATTGACAGGTCATGCAGATCAGGATTTTGGAGTTTATCCTGATCTCACTTACATTGACATCAGCTTCAACAGAGTGCAGGGTGAGCTCTCTGCAAACTGGGGTTCCTGCCAAAGCTTAGAAGCTCTTATCATGGCTGGCAATTCAATCAGGGGAAATATTCCAGGTGAGATGTTTCAATTGAAACAACTACAAAAGCTTGACTTATCATGGAACCATATATCTGGCGAGATACCAACACAAATCAGAAATGCCTCCATGTTATACCTTTTAAAGTTAGACAGAAACAATATTTCAGGTATGATGCCTGCAAGCATTGGAAGTCTTTCTAATTTGGAGTTATTAGACCTGTCAATGAATAGGCTCAGTGGATCTATCCCTTATCAATTAGGGAATTGCTACAAGCTGCTCAACTTAAATTTGAGTCATAATGACTTCAATAGCCAAATCCCTTATCAAATTGGGAATCTTTACTCCCTAGAAGATTTTTTGGACTTGAGTTATAATTCACTTTCTGGAAAAATCCCTGTTGATCTTAGTAAGCTCAACAACTTGATAAATATGAATCTGTCTCATAACAATTTATCAGGTTCTATCCCCGATTCCCTTAGTACAATGTTGAGCTTGTCGAGCATCAACCTCTCTTACAACAATTTGGAGGGTCCTGTACCAAATAGTGGCATATTTGATATATCTTATCAATCAGATCTGAGTAATAACAAAGATTTATGTGGGAGAATCCATGGTTTGAGACCTTGCAATGTTTCAATATCACATTGGAGAAGCAACAAAGGGAAAGCTGTGATATCTATTGTTGCTTCTTTAGCAGGTCTACTACTTGTTTCATTGGTGTTAGTTGGGATTTTTGTTGTTTGTTCAAAACTAAAGTCAAGAATTATAGAACAGAATTCAGGAATCATGAAGGAAAGTACATTTTCAATCTTACATTTTGATGGGAAAAATCTGTATGATGACATAATTGAAGCAACTGAGAACTTTGATGACAAGTATTGTATAGGGCAAGGAGCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAAAAACTTGCGATAAAGAAGTTTAGATGTGAAGAATATGATTTAGATCTTCAAATTTTAAAAGCCTTCAAAAGTGAGATTGAAGCAATGACAGAAATCCGCCATCGAAACATTGTGAAGCTCTACGGGTTTTGCTCACAAAGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGTGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAAAGTTAGATTGGCTTAAGAGGGTGGATATTGTCAAATGCGTAGCAGAAGCTTTATCTTATATGCATCATGATTGTGATCCACCAATTATTCATAGAGACATATCAAGCAAAAATATATTATTGTCTGGAAATCTTGAAGCCCATGTGTCAGATTTTGGCACAGCAATGTTCTTGAAGTCTAACTCATCAGTTTTGACGGCATTTGCTGGCACACTTGGCTATGCTGCTCCAGAGCTTGCGTATACGCTAACGGTGTCTGAGAAATGTGATGTGTTTAGCTTTGGCGTATTGGCTTTTGAAATTCTCATGGGAGAGCATCCTGGTGATCTAATTTCTCATGTACACGCCTTTGATGATGATCCAAACATCAACTTCAAAGAGATTTTAGACCCCCGTTTGTCACCTCCTAAAGAGCAGCAAAAGTTGATGAAGGAAGTGATTTTGATTGCAAATCTAGCTATTTCATGTTTACAAACTAACCCCTCATCTCGACCAACCATGCGAAGCATCGCTCAAATGATGGATCGTGCTCATCATCATTGA 2130 0.3798 MALNNLSGIIPPSIGRLTNLTDVRFHRNHLHGDLPQEFGNVSSLIVVHLSYNNFSGHLPPQVCRGGKLVNFTAAYNSLSGPIPMSLRNCSSLYRVQLQHNQLTGHADQDFGVYPDLTYIDISFNRVQGELSANWGSCQSLEALIMAGNSIRGNIPGEMFQLKQLQKLDLSWNHISGEIPTQIRNASMLYLLKLDRNNISGMMPASIGSLSNLELLDLSMNRLSGSIPYQLGNCYKLLNLNLSHNDFNSQIPYQIGNLYSLEDFLDLSYNSLSGKIPVDLSKLNNLINMNLSHNNLSGSIPDSLSTMLSLSSINLSYNNLEGPVPNSGIFDISYQSDLSNNKDLCGRIHGLRPCNVSISHWRSNKGKAVISIVASLAGLLLVSLVLVGIFVVCSKLKSRIIEQNSGIMKESTFSILHFDGKNLYDDIIEATENFDDKYCIGQGASGKVYKMVMQGGEKLAIKKFRCEEYDLDLQILKAFKSEIEAMTEIRHRNIVKLYGFCSQRSHTFAVYEYMEGGTLADFLKNDTKALKLDWLKRVDIVKCVAEALSYMHHDCDPPIIHRDISSKNILLSGNLEAHVSDFGTAMFLKSNSSVLTAFAGTLGYAAPELAYTLTVSEKCDVFSFGVLAFEILMGEHPGDLISHVHAFDDDPNINFKEILDPRLSPPKEQQKLMKEVILIANLAISCLQTNPSSRPTMRSIAQMMDRAHHH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3493g00001 709 ProSitePatterns Tyrosine protein kinases specific active-site signature. 558 570 IPR008266 GO:0004672|GO:0006468
Pral3493g00001 709 FunFam MDIS1-interacting receptor like kinase 2 513 709 - -
Pral3493g00001 709 SMART LRR_typ_2 282 306 IPR003591 -
Pral3493g00001 709 SMART LRR_typ_2 161 185 IPR003591 -
Pral3493g00001 709 SMART LRR_typ_2 41 65 IPR003591 -
Pral3493g00001 709 SMART LRR_typ_2 17 40 IPR003591 -
Pral3493g00001 709 SMART LRR_typ_2 209 233 IPR003591 -
Pral3493g00001 709 Gene3D Ribonuclease Inhibitor 1 355 IPR032675 -
Pral3493g00001 709 SUPERFAMILY RNI-like 4 322 - -
Pral3493g00001 709 PANTHER LEUCINE RICH REPEAT KINASE 2 2 705 - -
Pral3493g00001 709 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Pral3493g00001 709 Pfam Leucine rich repeat 188 246 IPR001611 GO:0005515
Pral3493g00001 709 ProSitePatterns Protein kinases ATP-binding region signature. 439 462 IPR017441 GO:0005524
Pral3493g00001 709 Gene3D Phosphorylase Kinase; domain 1 393 512 - -
Pral3493g00001 709 SUPERFAMILY Protein kinase-like (PK-like) 420 703 IPR011009 -
Pral3493g00001 709 Pfam Protein kinase domain 436 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00001 709 PRINTS Leucine-rich repeat signature 164 177 - -
Pral3493g00001 709 PRINTS Leucine-rich repeat signature 209 222 - -
Pral3493g00001 709 FunFam Leucine-rich repeat receptor protein kinase MSP1 396 512 - -
Pral3493g00001 709 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 41 357 - -
Pral3493g00001 709 ProSiteProfiles Protein kinase domain profile. 433 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3493g00001 709 Gene3D Transferase(Phosphotransferase) domain 1 513 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3493g00001 Pral-Chr3493 4791 7381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3493g00001 4 606 Receptor kinase-like Gene Family AT4G08850 46.634 1.51e-175 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3493g00001 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3493g00001 - - gmx:100814345 921.383