Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3488g00005 ATGGCACAACTCGTCAACCTCACATTGTTGCTAGTGATGATTCTCCTCTTATCTCTCTTCTCAATGGATGCTGCGGCTAAGCCATCAATCAACAGACCTCAACGTCGATATAATCCTCAAACCATCGTTTACATAAAAGCCTCTTGTCAAACCACTTTGTACCCAAATCTGTGCCTTCGCTGCTTATATAAATTTGCCAAATCAAATATTCAAAGCCCACAACACTTGGCTCATGTGGCTTTATCTGTGAGTTTCTCACGAGCACTATACACAAGAGATTACTTGCTCCAAGTGGGGAAACAATTCAAGGCCCTCAAGAACAGTAACAATCGTAGAGACTATGTAGTTCTGCAAGATTGCTTGAAGCAGATCAATGATAGTGTGGACCAGCTTGGGTTTTCAATAAAAGAGCTTGAGCGGTTGAATAAGATCCCAAACACTTTGATCAATGATGGCGTCTTGTGGCACATAAGTAATGTCGAGACGTGGGTGAGCACTGCCCTTACTGATGCGAGAACTTGTGTGGATTACTTCCCAGGTCATAGGATGAGTAAGATGAAGGCTACAATAAGGGGTAAGGTCTTGAACGTTGCTCAAGTCACCAGTAATGCACTTGCCATATTTCACAAATATGCAGCCAAGTACCAAGCAGCAGCACAAGCCAATAAGAGACCTTGA 678 0.4307 MAQLVNLTLLLVMILLLSLFSMDAAAKPSINRPQRRYNPQTIVYIKASCQTTLYPNLCLRCLYKFAKSNIQSPQHLAHVALSVSFSRALYTRDYLLQVGKQFKALKNSNNRRDYVVLQDCLKQINDSVDQLGFSIKELERLNKIPNTLINDGVLWHISNVETWVSTALTDARTCVDYFPGHRMSKMKATIRGKVLNVAQVTSNALAIFHKYAAKYQAAAQANKRP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3488g00005 225 CDD PMEI-like_3 47 209 - -
Pral3488g00005 225 FunFam Pectinesterase inhibitor 3 40 212 - -
Pral3488g00005 225 SMART PMEI_2 40 207 IPR006501 GO:0004857
Pral3488g00005 225 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 207 - -
Pral3488g00005 225 NCBIfam pectinesterase inhibitor domain 8 211 IPR006501 GO:0004857
Pral3488g00005 225 Pfam Plant invertase/pectin methylesterase inhibitor 45 207 IPR006501 GO:0004857
Pral3488g00005 225 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 211 IPR035513 -
Pral3488g00005 225 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3488g00005 Pral-Chr3488 455836 456513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3488g00005 4 224 Carbohydrate Esterase AT5G53370 26.316 5.29e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3488g00005 - - pcin:129315147 337.806