Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3470g00001 ATGGCGACCAATAAGGAGGAGGCAAAACATGAAAGGAAGGCACTTGGGATGACGGGTGAAAATGGAGGAAGTGGCACGGTGTCGGAGGAGGTAGTTCTAAAGAAAGGACCGTGGACGGCGGCGGAGGACGCGGTTCTGGTAGAGTATGTGACAAAGCATGGAGAAGGGAACTGGAATGCAGTACACAAAAATACAGGACTAGCTCGTTGCGGCAAGAGCTGTAGGCTGAGATGGGCGAACCATTTGCGACCCAATTTGAAGAAGGGTGCTTTCTCTCCTGAGGAAGAGAAGCTCGTCCTAGAGCTTCATGCGCAGTTTGGTAACAAATGGGCCCGCATGGCTGCTCTTTTACCTGGGCGTACGGACAATGAAATCAAGAATTATTGGAACACAAGGGTGAAGCGTTGTCAACGGCAAGGACTGCCTCTTTATTCCGATGAACCTGGTCGTTCCACTACCTCTGCTAAACCCATCGCCGTCGGTCTTCCTCCTCCTGCCTCACAGATCGAGTTCCTTCATCACCATCACTATCACCCTTTGTCTTCTCCCACCCCACCTCCCCATTCTCCTCTATCATCGCCACTTCAGCCTAAACCTTCCATTTCTGACCCCATGATTCCTCTTTCTTCCCCTTCTTCTTCTACGTCCTCTCATTCCTTCATCTTCAGCCGCCCCACTCCACTTCTGTCTAACCCACTTGGCTTCAAGCGATTCCGCACTTCTTCTGGTTATCCCATACGAGTGGCTCCCACTACTATTGTAACCTCTACTTCACTTCCAGATCAGCCACTGACGGCGGCTCAGTCTGTCGAGTATCCTGGATTCCGATTTACTGGTCAAGTTAACTCTGGTTTATCTCATATTTATCATGCTCCATTGTTAGAGTACAATCGAGGAGGGATTTTCAACCAATTTGCTAATTCTCCTGCAAAACTTGAGCTCCCTTCAAACCAATTTTCCCAGTCTAATATTATACAGCCAGAGAGTAAGTTTAACATCCAAATGAACAATGGTGGTGCTATGAAGAACAGTGGCGGTGGTAATGGGTTTCTGAGAGATCCTCTCTTTGAAGCTCAGACTTTGACATCTGACCAGACGGCACTAAAGAAACGAAATTACTTCTATCCAGATGAATTGCATCTTAACTCTTCTGACTGGTCTTCAAATGCAGAACTGGAACTGAAGGAAGAAGCACAAGATAACCTGAGTAAATCCATGAACGACGACTTATCTTCAATGCTTGCCGTCATGCCATCGACCCTGTCAATTTCAGATTGGCCTAACGGCGGCAGTGCTGCAGAAGAAGTTTCTGCCAATGTTCAATCTTCTGGTGTCATTCCAGACGATAATTTTGGACTTGACAATAGACCCATTGCTTCTTTCTTTCCCATAACAAGCACAACAAATCAGAATGACAATTCTGGATGTTACTCTTGGGACGACTTACCAGGATTTTGCTGA 1461 0.4695 MATNKEEAKHERKALGMTGENGGSGTVSEEVVLKKGPWTAAEDAVLVEYVTKHGEGNWNAVHKNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLVLELHAQFGNKWARMAALLPGRTDNEIKNYWNTRVKRCQRQGLPLYSDEPGRSTTSAKPIAVGLPPPASQIEFLHHHHYHPLSSPTPPPHSPLSSPLQPKPSISDPMIPLSSPSSSTSSHSFIFSRPTPLLSNPLGFKRFRTSSGYPIRVAPTTIVTSTSLPDQPLTAAQSVEYPGFRFTGQVNSGLSHIYHAPLLEYNRGGIFNQFANSPAKLELPSNQFSQSNIIQPESKFNIQMNNGGAMKNSGGGNGFLRDPLFEAQTLTSDQTALKKRNYFYPDELHLNSSDWSSNAELELKEEAQDNLSKSMNDDLSSMLAVMPSTLSISDWPNGGSAAEEVSANVQSSGVIPDDNFGLDNRPIASFFPITSTTNQNDNSGCYSWDDLPGFC 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3470g00001 486 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Pral3470g00001 486 MobiDBLite consensus disorder prediction 195 212 - -
Pral3470g00001 486 MobiDBLite consensus disorder prediction 1 27 - -
Pral3470g00001 486 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 18 438 - -
Pral3470g00001 486 Gene3D - 34 87 - -
Pral3470g00001 486 FunFam MYB-related transcription factor 34 87 - -
Pral3470g00001 486 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Pral3470g00001 486 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Pral3470g00001 486 FunFam Transcription factor GAMYB 90 136 - -
Pral3470g00001 486 MobiDBLite consensus disorder prediction 176 212 - -
Pral3470g00001 486 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 82 IPR017930 -
Pral3470g00001 486 MobiDBLite consensus disorder prediction 180 194 - -
Pral3470g00001 486 SUPERFAMILY Homeodomain-like 34 129 IPR009057 -
Pral3470g00001 486 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Pral3470g00001 486 MobiDBLite consensus disorder prediction 1 16 - -
Pral3470g00001 486 SMART sant 87 135 IPR001005 -
Pral3470g00001 486 SMART sant 34 84 IPR001005 -
Pral3470g00001 486 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Pral3470g00001 486 CDD SANT 37 82 IPR001005 -
Pral3470g00001 486 CDD SANT 90 131 IPR001005 -
Pral3470g00001 486 Gene3D - 90 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3470g00001 Pral-Chr3470 41362 44767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3470g00001 19 486 MYB Transcription Factor Family AT4G26930 35.642 4.37e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3470g00001 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3470g00001 - - ahf:112723793 375.941