LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3461g00003	ATGGTTGGACTTGACAACAATCATTTAAAGGATAATTTGCCAGAAGAAATGTGTCATGATCTCCCTTTACTTGAAGTCTTTGGTGTTGATGATAATCAATTAGAGGGAAGCATTCCGAACTTAATAAGCAACTGCACATCTTTGAAAAGATTATATTTGGATGGTAACTCATTTACAGAGTATGGATCAAAAGGAGTTGTGTCTGCAAAAGGAGATGTGTATAGCTATGGTATTTTGCTGATGGAAATGTTCACGAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGACTGGGTGAGAAAATCCACACCATATTCAATCATCAATATTATAGATGTAAATTTGTTGCATAGAAAAAATCAAAATACTGATAATATATTATGTCATATATCATCAGTTTTTGATCTAGCATTAAAGTGTTGCAATGACTTACCTGAAGCACGACTTACTATGATTGATGTTGCAGTGTCATTGAAAAACATCAAGGCTTTGTTAATGGAAAATGCTAGGGACATTATTAGTTGA	540	0.3352	MVGLDNNHLKDNLPEEMCHDLPLLEVFGVDDNQLEGSIPNLISNCTSLKRLYLDGNSFTEYGSKGVVSAKGDVYSYGILLMEMFTRKKPTDEMFVQGLSLKDWVRKSTPYSIINIIDVNLLHRKNQNTDNILCHISSVFDLALKCCNDLPEARLTMIDVAVSLKNIKALLMENARDIIS	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3461g00003	179	Gene3D	Transferase(Phosphotransferase) domain 1	59	173	-	-
	Pral3461g00003	179	Gene3D	Ribonuclease Inhibitor	2	58	IPR032675	-
	Pral3461g00003	179	Pfam	Protein tyrosine and serine/threonine kinase	63	159	IPR001245	GO:0004672\|GO:0006468
	Pral3461g00003	179	SUPERFAMILY	Protein kinase-like (PK-like)	60	169	IPR011009	-
	Pral3461g00003	179	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	4	59	-	-
	Pral3461g00003	179	SUPERFAMILY	L domain-like	4	61	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3461g00003	Pral-Chr3461	31052	36781	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3461g00003	55	175	Receptor kinase-like Gene Family	AT3G47570	35.537	1.31e-20	86.7

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Pral3461g00003		PK_Tyr_Ser-Thr	3.1e-05	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3461g00003	-		K13420	pcin:129285519	176.022