Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00010 ATGAAAGTAGCAAGACTTCTTAGAGTCAAGTGTGTGGTAGTTGGAACTCTAATCTCAGGTGAGATTGACTATAACCAACTAAAGAAGTCACTTCTTGCAAACAAGGACAAGCCAGCCATAATCAACCTAAACATAGGGACTACCTTGAAGGGCGCCATTGATGACCTGGATCTTGTACTCCAATCACTTGAGGACTGTGGTTTCACTCAAGATCGATTCTACATTCATTGTGATGCCGCACTATACGGAATGATGGTACCTTTCGATGTTCGAGCAGCAGATATTTCTTTCAAGAAACCGATTGGAAGCATAACTATTTCTGGACACAAGTTCCTGGGCTGTCCAATGCCTTGTGGCATTTTTATAACTCGTTTAAGACACATTGATTTTCTCTCAAGCGAAAAAGTAGAATACATTGCCTCAAAAGACAACACCATATCTGGAAGTCGAGGAGGCCATGCTGCCATCTTCATTTGCTATGCTCTCAACAAGAAAGGGTTCGAGGGCCTTCAACAAGAAGTTCAAGAATGCATCAAGAAAGCGATTTACCTTCGAGACTCCTTGAGATACCACGGCATTGGAGCATTGCTAAACAAGTTCAGCAACACTGTGGTGTTTGAGAGGCCTCAAGATGATGCGTTTGCTCGCAAGTGGAGCTTGGCTAGCAAAGGGAATATATCACATGTGGTAGTGATGCAACATGTGTCGCAGGAAATGTTGGATTCGTTTGTGAGTGAGTTTGTGAAGAATCGTTGTGCTTGGTACCAAGGTAATAATAAGCAAATGAAGCCTCCTTGCGTTGCTGAGGATATTGGTGCTGAGAATTGTGCTTGTGCTTTTCATAAGACGACGATTTCTTGGTAA 864 0.4282 MKVARLLRVKCVVVGTLISGEIDYNQLKKSLLANKDKPAIINLNIGTTLKGAIDDLDLVLQSLEDCGFTQDRFYIHCDAALYGMMVPFDVRAADISFKKPIGSITISGHKFLGCPMPCGIFITRLRHIDFLSSEKVEYIASKDNTISGSRGGHAAIFICYALNKKGFEGLQQEVQECIKKAIYLRDSLRYHGIGALLNKFSNTVVFERPQDDAFARKWSLASKGNISHVVVMQHVSQEMLDSFVSEFVKNRCAWYQGNNKQMKPPCVAEDIGAENCACAFHKTTISW 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00010 287 Gene3D - 1 151 IPR015421 GO:0003824
Pral3450g00010 287 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 192 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral3450g00010 287 SUPERFAMILY PLP-dependent transferases 2 249 IPR015424 -
Pral3450g00010 287 PANTHER - 1 282 - -
Pral3450g00010 287 Gene3D Aspartate Aminotransferase, domain 1 156 251 IPR015422 GO:0003824
Pral3450g00010 287 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 103 124 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00010 Pral-Chr3450 288054 289565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00010 45 189 Calmodulin-binding Proteins AT1G65960 27.044 1.86e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00010 K25193 - csv:116404591 374.785