Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00009 ATGGATAAAGTCATTGATGACTATGTCGACCGTATGTCTCACACAAGAGATCATTTCTTAGGTTATCCAACCAATCTAGACTTCAACTACGATGCACTCGAGAAGTTACTACGTTTACACTTGAACAACGCTGGTGATCCATTTATAGGCAGCGGTTATTCACTTGACTCAAACCCATTTGAGCTGTGCGTACTTCATTGGTTTTCCGAACTGTGGAAAATAGAGAAGAATGAGTACTGGGGATATATTACGACTGGTGGAACTGAAGGAAATTTTCACGGGCTCTTAGTTGGGAGAGAACTACATCCCGAAGGAATTATTTACACATCATGGGACTCGCATTATTCAGTGATGAAAGTAGCAAGACTTCTTAGAGTCAAGTGTGCGGTAGTGGGAACTCTAATCTCAGGTGAGATTGACTATAACGAACTAAAGTCACTTCTCGCAAACAAGGACAAGCCAGCCATAATCAACCTAAATGCAGGGACTACCTTAAAGGGAGCCATTGGTGACCTGGATCTTGTGCTCCAATCACTTGAGGACTGTGGTTTCACTCAAGATCGATTCTACATTCACTGTGATGCCGCACTATCCGGAATGATGGTACCTTTCGATGTTCGCGCACCAGATATTTCTTTCAAGAAACCCATTGGAAGCATAACTATTTCTGGCCACAAGTTCCTGGGCTGTCCAATGCCTTGTGGCATTTTTATAACTCGTTTAAAACACATTGATTTTCGCTCAAGCGAAAAAGTAGAATACATTCCCTCAAAAAACAATACCATCTCTGGAAGTCGAGGAGGCCATGCTGCCATCTTCATTTGGTATGCTCTCAACAAGAAAGTGTTCAATGGCCTTCAACAAGAAGTCCAAGAATGCATCAAGAAAGCGATTTACCTTCGAGACTCCTTGAGAGAGGACGGCATTGGAGCATTGCTAAACAAGTTCAGCAACACTGTGGTGTTTGAGAGGCCTCAAGATGATGCGTTTGCTCGCAAGTGGAGCTTGTCTAGCAAAGGGAATATATCACATGTGGTTGTGATGCAACATGTGTCGCAGGAAATGTTGGATTCGTTTGTGAGTGAGTTTGTGAAGAATCGTTGTGCTTGGTACCAAGGTAATAATAAGCAAATGAAGCCTCCTTGCGTTGCTGAGGATATTGGTGTTGAGAATTGTGCTTGTGCTTTTCATAAGACGACGATTTCTGGAAATGTTGGACTCATTTGTGAGTGA 1233 0.4274 MDKVIDDYVDRMSHTRDHFLGYPTNLDFNYDALEKLLRLHLNNAGDPFIGSGYSLDSNPFELCVLHWFSELWKIEKNEYWGYITTGGTEGNFHGLLVGRELHPEGIIYTSWDSHYSVMKVARLLRVKCAVVGTLISGEIDYNELKSLLANKDKPAIINLNAGTTLKGAIGDLDLVLQSLEDCGFTQDRFYIHCDAALSGMMVPFDVRAPDISFKKPIGSITISGHKFLGCPMPCGIFITRLKHIDFRSSEKVEYIPSKNNTISGSRGGHAAIFIWYALNKKVFNGLQQEVQECIKKAIYLRDSLREDGIGALLNKFSNTVVFERPQDDAFARKWSLSSKGNISHVVVMQHVSQEMLDSFVSEFVKNRCAWYQGNNKQMKPPCVAEDIGVENCACAFHKTTISGNVGLICE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00009 410 PANTHER - 1 398 - -
Pral3450g00009 410 SUPERFAMILY PLP-dependent transferases 12 365 IPR015424 -
Pral3450g00009 410 Pfam Pyridoxal-dependent decarboxylase conserved domain 105 314 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral3450g00009 410 Gene3D Aspartate Aminotransferase, domain 1 278 367 IPR015422 GO:0003824
Pral3450g00009 410 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 219 240 IPR021115 GO:0016831
Pral3450g00009 410 Gene3D - 39 277 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00009 Pral-Chr3450 215488 221608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00009 162 306 Calmodulin-binding Proteins AT1G65960 25.157 1.94e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00009 K25193 - gmx:100784867 525.013