Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00008 ATGTCTCACACAAGAGATCATTTCTTAGGTTATCCAACCAATCTAGACTTCAACTACGATGCACTGGGGAAGTTACTACGTTTCCACTTGAACAACGCTGGTGATCCATTTATAGGCAGCGGTTATTCACTTAACTCAAACCCATTTGAGCTGTGCGTACTTCATTGGTTTGCCGAACTGTGGAAAATAGAGAAGAATGAGTACTGGGGATATATGACGACTGGTGGAACTGAAGGAAATTTTCACGGGATCTTAGTTGGGAGAGAACTACATACCGAAGGAATTATTTACACATCATGTGACTCGCATTATTCAGTGATGAAAGTAGCAAGACTTCTTAGAGTCAAGTGTGTGGTAGTTGGAACTCTAATCTCAGGTGAGATTGACTATAACCAACTAAAGAAGTCACTTCTTGCAAACAAGGACAAGCCAGCCATAATCAACCTAAACATAGGGACTACCTTGAAGGGCGCCATTGATGACCTGGATCTTGTACTCCAATCACTTGAGGACTGTGGTTTCACTCAAGATCGGTTCTACATTCATTGTGATGCCGCACTATTCGGAATGATGGTACCTTTCGATGGTCGAGCAGCAGATATTTCTTTCAAGAAACCCATTGGAAGCATAACTACTTCTGGGCACAAGTTCCTGGGCTGTCCAATGCCTTGTGGCATTTTTATAACTCGTTTAAGACACATTGATTTTCTCTCAAGCGAAAAAGTAGAATACATTGCCTCAAAAGACAACACCATATCTGGAAGTCGAGGAGGCCATGCTGCCATCTTCATTTGGTATGCTCTCAACAAGAAAGGGTTCAAGGGCCTTCAACAAGAAGTTCAAGAATGCATCAAGAAAGCGATTTACCTTCGAGACTCCTTGAGGTACCACGGCATTGGAGCATTGCTAAACAAGTTCAGCAACACTGTGGTGTTTGAGAGGCCTCAAGATGATGCGTTTGCTCGCAAGTGGAGCTTGGCTAGCAAAGGGAATATATCACATGTGGTAGTGATGCAGCATGTGTCGCAGGAAATGTTGGATTCGTTTGTGAGTGAGTTTGTGAAGAATCGTTGTGCTTGGTACCAAGGTAATAATAAGCAAATGAAGCCTCCTTGCGTTTCTGAGGATATTGGTGCTGAGAATTGTGCTTGTGCTTTTCATAAGACGACGATTTCTGGAAATGTGGGACTCATTTGTGAGTGA 1203 0.4289 MSHTRDHFLGYPTNLDFNYDALGKLLRFHLNNAGDPFIGSGYSLNSNPFELCVLHWFAELWKIEKNEYWGYMTTGGTEGNFHGILVGRELHTEGIIYTSCDSHYSVMKVARLLRVKCVVVGTLISGEIDYNQLKKSLLANKDKPAIINLNIGTTLKGAIDDLDLVLQSLEDCGFTQDRFYIHCDAALFGMMVPFDGRAADISFKKPIGSITTSGHKFLGCPMPCGIFITRLRHIDFLSSEKVEYIASKDNTISGSRGGHAAIFIWYALNKKGFKGLQQEVQECIKKAIYLRDSLRYHGIGALLNKFSNTVVFERPQDDAFARKWSLASKGNISHVVVMQHVSQEMLDSFVSEFVKNRCAWYQGNNKQMKPPCVSEDIGAENCACAFHKTTISGNVGLICE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00008 400 Gene3D Aspartate Aminotransferase, domain 1 262 357 IPR015422 GO:0003824
Pral3450g00008 400 SUPERFAMILY PLP-dependent transferases 6 355 IPR015424 -
Pral3450g00008 400 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 209 230 IPR021115 GO:0016831
Pral3450g00008 400 Pfam Pyridoxal-dependent decarboxylase conserved domain 51 298 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral3450g00008 400 PANTHER - 3 388 - -
Pral3450g00008 400 Gene3D - 42 257 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00008 Pral-Chr3450 175133 181097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00008 151 295 Calmodulin-binding Proteins AT1G65960 26.415 2.08e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00008 K25193 - gmx:100784867 530.02