Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00005 ATGGATGCCAAGAGACAGGTCACGGCCAAGCACATAAAGTCTGAGCTCTTTGATCGCCCACTTTGTACCTCTTTCAAGGTTCTTGACAAGGAGTCCATCGACTTCGTCTTCGTCTTCGTTTTCGTCTCCGTTCCGAACTTCGGCATATGCTCACACCTCTACTTAACAACAAACCAAAGGGATCAATCCTCGAAAGTTACTAAAGGTCGAGCCACATATAAGCAAGAGATGCGCCTGTGGGACGAAGACACTGCGAAACTCGCAAATTTCAACACCAGTTTCACCTTCGTTATTGATTCACAGGGAAGTAGTTTGCTTGGAGATGGGCTGACCTTCTTCTTAGCCCCTACTGGTTCAAAGCTTCCTGATCGTAAAGACGTTGGAGGAGGTTCCATGGGTCTAATTATTGGAGGCAACGAAACGATACTTAATTCAACAGATCATCCTTTTGCTGCTGTGGAGTTTGATATTTATCCCAGTGTCGAATCTTACGATGGCTGGGATCCTCGGTATGTACATGTGGGTGTGGATATCAATTCTATGAAATCTACTAGTACTGCGCCATGGTATCCTAATATCACAGGAGGCGGACAAAATGAGGCTTTCATCAGCTACGATGCAAGTAAACATAATTTAACTATCTCCTTTACAAATTCTGGTCCTTCTGCCAACACTGTGTGGCAACATCTTCATGAAATAGTTGACCTGACAAGGTACCTGCCTGAACGGGTTACTTTTGGTTTCTCAGCTGCCACGGGACAAAATTTTGCAACACACAGGATCGACAAATGGAGTTTCTACTCAGATGAGTTCCCGAAAGATGCTCCCAGTCCAAACCCAAGCCCAAGACCAAGTCCCAACCCAAAAGGAAATGCCACAGCACTTGCAACAGGATTAGGGATTGGAGGGACTTTGGTTTTAGTTTGTGGGGTGCTGTTGTTTGCACTCTGGAAGAATAAAAATAATACGGAAGATGATGAGTCTAGTGAGAAAATGAGTGACGATTTTGAAAAAGGAACTGGGCCTAAAAAGTACTCAAATGCTGAACTAGTGAGTGCTGCAAATTATTTCAGAGATGAGCAAAAGCTTGGACAGGGAGGATTTGAGGGTGTTTATAGAGGTTTTCTCAAAGATTCAAACTCCTACGTGGCCATAAAGAGAATATCAATAGATTCTAAACAAGGGAAGAAGGAGTTTGCTTCAGAAGTAAGAATTATCAGCCAACTAAGACATCGAAACTTGGTTCAACTAAGCGGTTGGTGTCATGAAAGAAAAGAATTATTGCTAGTTTATGAGTACATGACACATGGAAGCTTAGATTATCATCTCTTCAATGACCAAAGCTTGTTGCCATGGTCAATTAGATTTAAAATAGCTCAAGGCTTGGCCTCTGCATTATTGTACCTGCATGAAGAATGGGAACAATGTGTTGTTCATAGAGACATAAAATCAAGCAACATCATGCTAGATTCTAACTTCAATGCAAAACTTGGAGATTTTGGATTAGCTCGGCTTGTAGACCACACAAAAGGAGCACAAACAACAGCTTTGGCAGGAACTATGGGCTATATGGCACCTGAATGTGTCACCACTGGAAGGGCTAGCAAAGAATCTGATGTCTATGGTTTTGGAGTTGTTGTTCTAAAGATACTTTCGGGAAGAGAACCCATCAACCCCAAGGCTCCAGAAGATGAAATAAACATAGTGCAATCGGTATGGGATCTCTATGGAAGTGGTAGAATCCTGGAAGCAATTGATCCAAGGCTGCAAGGAGATTTTGACCATGATCAAGTCGAATGCCTCATGATTGTTGGGTTATGGTGCGCTCATCCTGATCAAAATCGTAGGCCTTCAATAAGGCAAGCAATTCATGTGTTAAACTTCGAAGCTACAATTCCTAGTCTTCCTTCAAGTTATCCTATACCAACGTATGGTGAATTTCCGGTGCCCTTATCATTTTCAATTCTATCCAACGCCAATGTTTCAGAGGTAAGTCAAAACCAGAACATTAGCTTTAGTTCCAACACAAATTCTTCTGGTTTCACTACAACTTCTGATGAGAATGTTTCACCATGTGTATCACTTTTGCACTCGCACAAAAATTAA 2106 0.4207 MDAKRQVTAKHIKSELFDRPLCTSFKVLDKESIDFVFVFVFVSVPNFGICSHLYLTTNQRDQSSKVTKGRATYKQEMRLWDEDTAKLANFNTSFTFVIDSQGSSLLGDGLTFFLAPTGSKLPDRKDVGGGSMGLIIGGNETILNSTDHPFAAVEFDIYPSVESYDGWDPRYVHVGVDINSMKSTSTAPWYPNITGGGQNEAFISYDASKHNLTISFTNSGPSANTVWQHLHEIVDLTRYLPERVTFGFSAATGQNFATHRIDKWSFYSDEFPKDAPSPNPSPRPSPNPKGNATALATGLGIGGTLVLVCGVLLFALWKNKNNTEDDESSEKMSDDFEKGTGPKKYSNAELVSAANYFRDEQKLGQGGFEGVYRGFLKDSNSYVAIKRISIDSKQGKKEFASEVRIISQLRHRNLVQLSGWCHERKELLLVYEYMTHGSLDYHLFNDQSLLPWSIRFKIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHTKGAQTTALAGTMGYMAPECVTTGRASKESDVYGFGVVVLKILSGREPINPKAPEDEINIVQSVWDLYGSGRILEAIDPRLQGDFDHDQVECLMIVGLWCAHPDQNRRPSIRQAIHVLNFEATIPSLPSSYPIPTYGEFPVPLSFSILSNANVSEVSQNQNISFSSNTNSSGFTTTSDENVSPCVSLLHSHKN 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00005 701 PANTHER - 57 636 - -
Pral3450g00005 701 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Pral3450g00005 701 CDD STKc_IRAK 363 627 - -
Pral3450g00005 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 269 IPR013320 -
Pral3450g00005 701 SMART serkin_6 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00005 701 ProSiteProfiles Protein kinase domain profile. 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00005 701 CDD lectin_legume_LecRK_Arcelin_ConA 55 269 IPR001220 GO:0030246
Pral3450g00005 701 Gene3D - 46 274 - -
Pral3450g00005 701 FunFam L-type lectin-domain containing receptor kinase IX.1 342 433 - -
Pral3450g00005 701 Pfam Protein kinase domain 357 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00005 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pral3450g00005 701 Pfam Legume lectin domain 53 276 IPR001220 GO:0030246
Pral3450g00005 701 MobiDBLite consensus disorder prediction 271 291 - -
Pral3450g00005 701 SUPERFAMILY Protein kinase-like (PK-like) 342 646 IPR011009 -
Pral3450g00005 701 FunFam Lectin-domain containing receptor kinase A4.3 434 646 - -
Pral3450g00005 701 Gene3D Transferase(Phosphotransferase) domain 1 434 647 - -
Pral3450g00005 701 ProSitePatterns Legume lectins alpha-chain signature. 240 249 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00005 Pral-Chr3450 101866 108969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00005 69 644 Receptor kinase-like Gene Family AT5G10530 48.818 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral3450g00005 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00005 - - pcin:129286332 877.47