Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00004 ATGTTGCTAGTATCAGTTTTCTTCCTCTTGATCCCCCATGTGCTTTCCTTAACCTTTAACTTCACCGAATTCCGGGGCGATGACAACATGACTTTAGAAAAATCAGCTCGTCTGCAGGGATCATCCATCGACTTGGTAACTCCGTTCACTGACGGTGTCGGGCGAGCAACATATCACCTACCGATGCACTTGTGGGACAAAGCCACCGGGAAACTCACAGATTTCTCCACCAACTTCACCTTTGTGATTTTTTCAAATAACAGCCTCAACGAGTCTGGCGATGGGATGGCCTTCTTCTTAGCCCCTAAGGATTCAAAGCTCCCTAATATTCCAGAAAGGGGAGGAGGTGGTTTGGGTCTGATAAGTCTGATTAATGCAACAGATCTTCCATTGATGGGTCTGAATAATTCAACAGATCATCCATTTGTTGCTGTGGAGTTTGATATCTTTCGCAATTACTGGGATCCTCCGTATATACATGTGGGTGTCGATATCAATTCTACTAATTCCGTTAGTTCTGTTCAATGGGACGCTGATATCAAAGGAGGCAGAACAAATGAGGCTTTCATCAGCTACAATGCAAGTACGCATAATTTAAGCATCTCCTTCACTGATGGTTTTGATCTTTCTAACAACACTGTGTGGCGACATCTTCATCACATAGTTGATCTACGAGAGTACCTGCCTGAATTGGTTACTTTCGGTTTCTCAGCCGCCACCGGACGATACTATGCAGTACACACGATCGATAGATGGAGTTTCCACTCAGAGGACCTCCCAACTGTTGCTCCTAGTCCAAGTCCAGTACCAAGTCTAAGCCCGAGCCCGAGCCCAAGCCGAACGAGTAGAAATTACACAGCACTTGCAACAGGATTAGGGGTTGGAGGATTACTGTTAGTTGTTGGGGCGGCATGGTTTGTGTTGTGGAAGAACAAAAAGAAAATGGAAGATGATGATTCTAATGAGAACATAAGTGAAGATGATTTTGAAAGAGGAACAGGTCCCAAAAAGTATTCATATGCTGAACTAGCAAGTGCTGCAAATTATTTTAAAGATGAGCACAAGCTTGGACAGGGAGGATTTGGAGGTGTCTACAGAGGTTTTCTCAAATATTCAAACTCCTATGTTGCCATAAAGAGAATATCAGAGGGCTCTAAACAAGGGAAGAGGGAGTTTGCTTCGGAAGTAAGAATTATTAGTCAACTAAGACATCGAAATTTGGTGCATCTAATCGGTTGGTGTAATGAAAGGAGAGAACTATTGCTAGTTTATGAGTACATGCCAAATGGAAGTTTAGATTCTCATCTTTTCAAGGACGAAAGGTTGCTGACATGGTCAATTAGATTTAAAATTACTCAAGGCTTGGCCTCTGCATTATTGTACCTGCACGAAGAATGGGAACAGTGTGTGGTCCATAGAGACATAAAATCAAGCAACATCATGCTAGACTCAAACTTCAATGCAAAACTTGGAGATTTTGGATTGGCACGGCTTGTAGACCACACAAAAGGAGCACAAACTACAGCTTTAGCAGGAACCATGGGCTATATGGCTCCTGAGTGTGTTATCACTGGAAGGGCTAGCAAAGAATCTGATGTCTATAGCTTTGGAATTGTTGCTCTAGAGATAGTTTGTGGGAGAAAACCCATCAACCCAAAGGCTCCAGATGATGAAATAAACATAGTGCAATCGGTATGGGATCTCTATGGAAGTGGTAGAATCCTGGAAGCAGTTGATCCAAGGCTGCAAGGAGATTTTGACCATGATCAAGTCGAATGCCTCATGCTTGTTGGGTTATGGTGTGCTCATCCTGATCAAAATCGCAGGCCTTCAATAAGGCAAGCAATTCATGTGTTAAACTTTGAAGCTAAAATTCCTAGTCTTCCTTCAAGTTATCCTATACCAACGTATGATGAATTTCCGGTGCCCTTATCATTTTCAATTCTATCCAATGCCAATGCTTCAGAGGTAAGTCCAAACCAGAAAATTAGCTTTAGTTCCAACACAAACTCTTCTGGTTACGCTACAACTTTCTGA 2037 0.4256 MLLVSVFFLLIPHVLSLTFNFTEFRGDDNMTLEKSARLQGSSIDLVTPFTDGVGRATYHLPMHLWDKATGKLTDFSTNFTFVIFSNNSLNESGDGMAFFLAPKDSKLPNIPERGGGGLGLISLINATDLPLMGLNNSTDHPFVAVEFDIFRNYWDPPYIHVGVDINSTNSVSSVQWDADIKGGRTNEAFISYNASTHNLSISFTDGFDLSNNTVWRHLHHIVDLREYLPELVTFGFSAATGRYYAVHTIDRWSFHSEDLPTVAPSPSPVPSLSPSPSPSRTSRNYTALATGLGVGGLLLVVGAAWFVLWKNKKKMEDDDSNENISEDDFERGTGPKKYSYAELASAANYFKDEHKLGQGGFGGVYRGFLKYSNSYVAIKRISEGSKQGKREFASEVRIISQLRHRNLVHLIGWCNERRELLLVYEYMPNGSLDSHLFKDERLLTWSIRFKITQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHTKGAQTTALAGTMGYMAPECVITGRASKESDVYSFGIVALEIVCGRKPINPKAPDDEINIVQSVWDLYGSGRILEAVDPRLQGDFDHDQVECLMLVGLWCAHPDQNRRPSIRQAIHVLNFEAKIPSLPSSYPIPTYDEFPVPLSFSILSNANASEVSPNQKISFSSNTNSSGYATTF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00004 678 SMART serkin_6 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00004 678 Gene3D Transferase(Phosphotransferase) domain 1 427 640 - -
Pral3450g00004 678 Gene3D - 15 261 - -
Pral3450g00004 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 15 259 IPR013320 -
Pral3450g00004 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Pral3450g00004 678 CDD lectin_legume_LecRK_Arcelin_ConA 17 256 IPR001220 GO:0030246
Pral3450g00004 678 CDD STKc_IRAK 356 620 - -
Pral3450g00004 678 ProSiteProfiles Protein kinase domain profile. 350 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00004 678 SUPERFAMILY Protein kinase-like (PK-like) 334 638 IPR011009 -
Pral3450g00004 678 FunFam Lectin-domain containing receptor kinase A4.3 427 639 - -
Pral3450g00004 678 Pfam Legume lectin domain 16 260 IPR001220 GO:0030246
Pral3450g00004 678 PANTHER - 42 629 - -
Pral3450g00004 678 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Pral3450g00004 678 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00004 678 FunFam L-type lectin-domain containing receptor kinase IX.1 335 426 - -
Pral3450g00004 678 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00004 Pral-Chr3450 96914 98950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00004 2 637 Receptor kinase-like Gene Family AT5G10530 47.846 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral3450g00004 Pkinase 3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00004 - - pcin:129286332 932.554