Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3450g00003 ATGTTGCTACTATACACTTTCTTCCTCTTCCTCTTGATGGCCCATGCGTTTTCCTTAAACTTCATCTTCCCCAGTTTCAATCGCGATCATTATAACAATATATCGTTTGAATTAGCAGCTGACATTTCAGAACCACACCTCTACTTAACAGCAAACCAGGGGGGTCAATCCTCGCAAAATAGTCAAGGTCGAGCCACATATAAGCAGGAGATGCGCCTGTGGGACAAAGACACTGGGAAACTCGCAAATTTCAACACCAGTTTCACCTTTGTGATTGATTCACGGGGAAGTAGTCGGTATGGAGATGGGCTGACCTTCTTCTTAAGCCCTACTGGTTCAAAGCTTCCTGATCGTAACGACGTTGGAGGAGGTTCTATGGGTCTAATTATTGGAGGCAACGAAACGATACTTAATTCAACAGATCATCCTTTTGTTGCTGTGGAGTTTGATATCTATCCCAATGTCGAATATTACGATGGGTGGGATCCTCCGTATGTACATGTGGGTGTGGATATCAATTCTGTGAAATCTACTCGTACTGTTCCATGGTATCCCGATGTCACAGGAGGCGGACAAAATGAGGCTTTCATCAGCTACGATGCAAGTAAACATAATTTAAGTATCTCCTTCACAAATACTTCTGGTCCTTCTGCCAACACTGTGTGGCAGCATCTTCATCAAATAGTTGACCTAACAAGGTACCTGCCTGAACGGGTTACGTTTGGTTTCTCAGCTGCCACGGGATATAATTTTGCAACACACAGGATCGACAAATGGAGTTTCTACTCAGATGAGTTCCCGAAAGATGCTCCCAGTCCAAACCCAAGCCCAAGCCCAAGACCAAGTCCGAACCCAAGCCCAAGACCAGGTCCCAACCCAAGCCCAAGACCAGGTCCCAACCCAAAAAGAAATGCCATAGCACTTGCAATAGGATTAGGGGTTGGAGGGACGTTGGTTTTAGTTTGTGGGGTGCTGTTGTTTGCACTGTGGAAGAATAAAAAGAATATGGAAGATGATGAGTCTAGTGAGAAAATGAGTGATGATTTTGAAAGAGGAACTGGGCCTAAAAAGTACTCATATGCTGAACTAGCGAGTGCTACAAGTTATTTCAAAGATGAGCAAAAGCTTGGACAGGGAGGATTTGGGGGTGTTTATAGAGGTTTTCTCAAAGATTCAAACTCCTATGTGGCCATAAAGAGAATATCAAGGGATTCTAAACAAGGGAAGAAGGAGTTTGCTTCAGAAGTAAGAATTATCAGCCAACTAAGACATCGAAACTTGGTTCAACTAAGCGGTTGGTGTCATGAAAGAAAAGAATTATTGCTAGTTTATGAGTACATGACACATGGAAGTTTAGATTATCATCTCTTCAAGGACCAAAGCTTGTTGCCATGGTCAATTAGATTTAAAATAGCTCAAGGCTTGGCCTCTGCATTATTGTACCTGCATGAAGAATGGGAACAATGTGTTGTTCATAGAGACATAAAATCAAGCAACATCATGCTAGATTCCAACTTCAATGCAAAACTTGGAGATTTTGGATTAGCTCGGCTTGTAGACCACACAAAAGGAGCACAAACAACAGCTTTGGCAGGAACTATGGGCTATATGGCACCTGAATGTGTCACCACTGGAAGGGCTAGCAAAGAATCTGATGTCTTTAGTTTTGGAGTTGTTGTTCTAGAGATACTTTCGGGAAGAAAACCCATCAACCCCAAGGCTCCAGAAGATGAAATAAACATAGTGCAATCGGTATGGGATCTCTATGGAAGTGGTAGAATCCTGGAAGCAGTTGATCCAAGGCTGCAAGGAGATTTTAACCATGATCAAGTCGAATGCCTCATGCTTGTTGGGTTATGGTGCGCTCATCCTGATCAAAATCGCAGGCCTTCAATAAGGCAAGCAATTCATGTGTTAAACTTTGAAGCTACAATTCCTAGTCTTCCTTCAAGTTATCCTATACCAACGTATGATGAATTTCCGGTGCCCTTATCATTTTCAATTCTATCCAATGCCAATGCTTCAGAGGTAAGTCCAAACAAGAACATTAGCTTTAGTTCCAACACAAACTCTTCTGGTTACGCTACAACTTTCTGA 2097 0.4254 MLLLYTFFLFLLMAHAFSLNFIFPSFNRDHYNNISFELAADISEPHLYLTANQGGQSSQNSQGRATYKQEMRLWDKDTGKLANFNTSFTFVIDSRGSSRYGDGLTFFLSPTGSKLPDRNDVGGGSMGLIIGGNETILNSTDHPFVAVEFDIYPNVEYYDGWDPPYVHVGVDINSVKSTRTVPWYPDVTGGGQNEAFISYDASKHNLSISFTNTSGPSANTVWQHLHQIVDLTRYLPERVTFGFSAATGYNFATHRIDKWSFYSDEFPKDAPSPNPSPSPRPSPNPSPRPGPNPSPRPGPNPKRNAIALAIGLGVGGTLVLVCGVLLFALWKNKKNMEDDESSEKMSDDFERGTGPKKYSYAELASATSYFKDEQKLGQGGFGGVYRGFLKDSNSYVAIKRISRDSKQGKKEFASEVRIISQLRHRNLVQLSGWCHERKELLLVYEYMTHGSLDYHLFKDQSLLPWSIRFKIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHTKGAQTTALAGTMGYMAPECVTTGRASKESDVFSFGVVVLEILSGRKPINPKAPEDEINIVQSVWDLYGSGRILEAVDPRLQGDFNHDQVECLMLVGLWCAHPDQNRRPSIRQAIHVLNFEATIPSLPSSYPIPTYDEFPVPLSFSILSNANASEVSPNKNISFSSNTNSSGYATTF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3450g00003 698 MobiDBLite consensus disorder prediction 267 301 - -
Pral3450g00003 698 SMART serkin_6 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00003 698 FunFam L-type lectin-domain containing receptor kinase IX.1 355 446 - -
Pral3450g00003 698 Pfam Protein kinase domain 370 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00003 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Pral3450g00003 698 Gene3D Transferase(Phosphotransferase) domain 1 447 660 - -
Pral3450g00003 698 CDD STKc_IRAK 376 640 - -
Pral3450g00003 698 CDD lectin_legume_LecRK_Arcelin_ConA 19 264 IPR001220 GO:0030246
Pral3450g00003 698 ProSitePatterns Protein kinases ATP-binding region signature. 376 399 IPR017441 GO:0005524
Pral3450g00003 698 SUPERFAMILY Protein kinase-like (PK-like) 354 660 IPR011009 -
Pral3450g00003 698 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Pral3450g00003 698 ProSiteProfiles Protein kinase domain profile. 370 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3450g00003 698 MobiDBLite consensus disorder prediction 270 300 - -
Pral3450g00003 698 PANTHER - 46 649 - -
Pral3450g00003 698 FunFam Lectin-domain containing receptor kinase A4.3 447 659 - -
Pral3450g00003 698 Pfam Legume lectin domain 18 271 IPR001220 GO:0030246
Pral3450g00003 698 Gene3D - 17 269 - -
Pral3450g00003 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 16 274 IPR013320 -
Pral3450g00003 698 Gene3D Phosphorylase Kinase; domain 1 355 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3450g00003 Pral-Chr3450 70860 72960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3450g00003 63 657 Receptor kinase-like Gene Family AT5G10530 48.520 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral3450g00003 Pkinase 8.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3450g00003 - - pcin:129286332 897.501