LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3450g00002	ATGCTCAACCTCACCAGATACAAGAAAGACAGTGCAGGGAGAGTAACATACAAGAACCTGCTGCAACTTGGGGACAAAGAGACAAGAACACTTGTAAACTTCATTACCCGTTTCAGCTTCATCATCAATGTACTAAATGAAACTCGTGATGGGCATGGAGATGGCATCACATTCTTCTTGGCACACCCGAATTTTCCATTTCCAGTGCCCCCAGATGGCACTGGTATTGGTCTTGTGGGTCGTAGAGAAATGGGAGATCCAACTTATGCTGATGCACATCCATTTGTAGCAGTCGAGTTTGACACCATGCTTAATGCAAGAGATCCACCTTATGATCATGTGGGAATCAATGTAAAACAAATGTGGTCTCCTTACACAACACAATGGTACACTATGAATGACGGTAGAAAGTATGATGCTGAGATTACCTACAATTCTAGCTCATTGCAGTTAAGTGTCATGTTCACAGGATATAAGAATAACATCAAAATCAGACAAAATTATTCCCATCAGATTGATTTGAGAGACTACCTACCAGAACAAGTTCAGTTTGGGTTCTCATCAGCCACAGGACTTCAGTTTGAGTTACATACGCTATGCTCATGGGCCTTCAATTCAAGTCTTAATAAAGTGTGGGGAGGAGTGGTGCAAAAGAGTAAAAGCAATAATAAGGGTTTGGTCATTGGATTGAGCATTGGATCGGTTGTAGGGGTTGGTGGGTTATGCATAGCTTGGTTCCTCATATGGAAGTTAAATTGCAGGGCAAGAAAAGATGATCGCTTGGATGTTTCTTTGGACAGAGACTTTGAAAGTGTTGGACCAAAGAAGTTTTCCTATAATGAACTTGCGCGAGCCACAAACAACTTTGCAGAGGAACACAAACTTGGAGAAGGAGGTTTTGGTGGTGTCTACAAAGGATTCATGAGAGGCTTAAATACTTTTGTTGCAATTAAGAAGGTGTCCAAAGAATCTAGACAAGGGGTAAAGGAGTATGCCTCTGAAGTAAAGATCATCAGTCAATTAAGGCACAAGAATTTGGTACAATTGATGGGTTGGTGCCACCAGAAAAATGATCTTCTACTCATCTATGAGTTCATGCCAAATGGAAGCTTAGATTATCATTTATTTAAAAGCAAAGACCTCTTGACATGGCCAACTCGATACAATATTGCTCAAGGTTTAGCCTCAGCAGTGCTCTACTTGCATGAAGAGTGGGAGCAATGCGTAGTCCACAGAGACATAAAATCAAGCAATATTATGTTGGACTCAAATTTCAACTCTAAGCTTGGAGATTTTGGATTAGCAAGACTCGTAGAACATGGCAAAGGGTTAACATCAACAATTGCAGCAGGAACAAAAGGATACATGGCTCCTGAATGTTTGGCGAGGGGCAAGGCCACAAGAGAATCTGACATGTACAGTTTTGGAGTTGTTGCTTTAGAAATAGCATGTGGGCGAAAACCAATTGACCCTAATGCTAGTGATGAACAAGTCATGATGGTGGAATGGGTGTGGGAACTCTATGGCAGAGGGGAGATTCTTGAAGCAGTTGACAAAAGGCTTGATAATGGAGATTTTGATGAGCAAGAAGTTGAAAGGTTAATGATTCTTGGGCTTTGGTGTGCTCACCCAGATTACACTACGAGGCCTGCAATCAGACAAGCACTTCATGTGCTTAACTTTGAAGCTCCATTGCCCACTCTTCCACCAACAATGCCCAAACCAATGTATGCTGCTCCAACTTTTTCTGATATTGGTTCTTCAAACTTTTCATCTGCTTATGCTAGTTCTTCTGCAACCAATCAAGCTAGGCCTTCACCAAGTAATAGGCCATACACTGGATCCTCACAATCATCCACGTCAGCACAAATCAAGGAAGGAAAATAG	1887	0.4171	MLNLTRYKKDSAGRVTYKNLLQLGDKETRTLVNFITRFSFIINVLNETRDGHGDGITFFLAHPNFPFPVPPDGTGIGLVGRREMGDPTYADAHPFVAVEFDTMLNARDPPYDHVGINVKQMWSPYTTQWYTMNDGRKYDAEITYNSSSLQLSVMFTGYKNNIKIRQNYSHQIDLRDYLPEQVQFGFSSATGLQFELHTLCSWAFNSSLNKVWGGVVQKSKSNNKGLVIGLSIGSVVGVGGLCIAWFLIWKLNCRARKDDRLDVSLDRDFESVGPKKFSYNELARATNNFAEEHKLGEGGFGGVYKGFMRGLNTFVAIKKVSKESRQGVKEYASEVKIISQLRHKNLVQLMGWCHQKNDLLLIYEFMPNGSLDYHLFKSKDLLTWPTRYNIAQGLASAVLYLHEEWEQCVVHRDIKSSNIMLDSNFNSKLGDFGLARLVEHGKGLTSTIAAGTKGYMAPECLARGKATRESDMYSFGVVALEIACGRKPIDPNASDEQVMMVEWVWELYGRGEILEAVDKRLDNGDFDEQEVERLMILGLWCAHPDYTTRPAIRQALHVLNFEAPLPTLPPTMPKPMYAAPTFSDIGSSNFSSAYASSSATNQARPSPSNRPYTGSSQSSTSAQIKEGK	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3450g00002	628	ProSiteProfiles	Protein kinase domain profile.	289	568	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3450g00002	628	ProSitePatterns	Legume lectins beta-chain signature.	96	102	IPR019825	-
	Pral3450g00002	628	CDD	lectin_legume_LecRK_Arcelin_ConA	2	208	IPR001220	GO:0030246
	Pral3450g00002	628	FunFam	Lectin-domain containing receptor kinase A4.3	366	579	-	-
	Pral3450g00002	628	SUPERFAMILY	Protein kinase-like (PK-like)	274	585	IPR011009	-
	Pral3450g00002	628	MobiDBLite	consensus disorder prediction	592	628	-	-
	Pral3450g00002	628	Gene3D	Phosphorylase Kinase; domain 1	274	365	-	-
	Pral3450g00002	628	SUPERFAMILY	Concanavalin A-like lectins/glucanases	2	208	IPR013320	-
	Pral3450g00002	628	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	409	421	IPR008271	GO:0004672\|GO:0006468
	Pral3450g00002	628	FunFam	L-type lectin-domain containing receptor kinase IX.1	274	365	-	-
	Pral3450g00002	628	Gene3D	-	1	213	-	-
	Pral3450g00002	628	ProSitePatterns	Protein kinases ATP-binding region signature.	295	319	IPR017441	GO:0005524
	Pral3450g00002	628	Pfam	Legume lectin domain	2	207	IPR001220	GO:0030246
	Pral3450g00002	628	Pfam	Protein kinase domain	290	557	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3450g00002	628	PANTHER	-	10	569	-	-
	Pral3450g00002	628	CDD	STKc_IRAK	295	560	-	-
	Pral3450g00002	628	SMART	serkin_6	289	559	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3450g00002	628	Gene3D	Transferase(Phosphotransferase) domain 1	366	579	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3450g00002	Pral-Chr3450	28749	32262	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3450g00002	12	577	Receptor kinase-like Gene Family	AT5G10530	47.150	2.45e-171	501

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral3450g00002		Pkinase	2.6e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3450g00002	-		-	cam:101491058	686.411