Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3440g00038 ATGAAGAGTGGGAAATATGCCTTGGGTTATAAAACGGTTCTGAATTCCCTTGGGAACTCAAAAGGGAAGCTAATTATAATTGCCAACAATTGCCCACCTTTAAGGAAACCAGAGATAGAATATTATGCAATGCTTGCCAAAGTGGGTGTGCATCACTACAATGGAAACAACGTTGGTTTGGGCACAGCATGCGGCAAATATTTACTGGTTTGTTGCCTCAGCATTATCGATCCTGGTGATTCTGATACTATCAAGACAATGGCTGGTGAACAGTGA 276 0.4167 MKSGKYALGYKTVLNSLGNSKGKLIIIANNCPPLRKPEIEYYAMLAKVGVHHYNGNNVGLGTACGKYLLVCCLSIIDPGDSDTIKTMAGEQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3440g00038 91 PANTHER RIBOSOMAL PROTEIN L30 1 89 IPR039109 GO:0003723
Pral3440g00038 91 SUPERFAMILY L30e-like 1 85 IPR029064 -
Pral3440g00038 91 FunFam 60S ribosomal protein L30 1 87 - -
Pral3440g00038 91 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 1 83 IPR004038 -
Pral3440g00038 91 Gene3D - 1 87 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3440g00038 Pral-Chr3440 596981 599719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3440g00038 1 91 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 78.022 3.06e-50 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3440g00038 K02908 - gmx:100806260 167.162