Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3440g00028 ATGGCATGCCCTGGGGAAGGTATTTTAACAGATCTTGCCAAGAGATTGGTAGATAAAACCATAAAGGAAGTTAATTACTGTCGTCATTTCGAGACTCATAATCACGAGTTTGATGAGGACAATCAACTTTTGCGTAGAAGATTAGAGAAAGTTCGAAAGGATATTGACGATGCCAACATTAATGAGCATGAGGTTGAAGGTGAATTTCAAGATTGGATAAAGAAAGCTGATAAACTAATTCAAATGAATGCTGAAGTTAGGCAAACAAGGTTTGATAGCTATTCTTTTCTTAGGAAATATCGACAAGGCAAGATATTGGCACGGAGGGCGCAAGTCATTAAAAGTCACATCCAAAATTATAAAAACTTTGAAGGAGTAGCTCGTCCAGGTAAACTTCCAGGTATGAAGTACCATGCTTCAAAAGACTTCATTGATTTTGAGAGCAGGAAGACAAAATTCAAGGAACTTTTGGATGCATTAGAAGATGGAAATCATTACATGATTGGATTGCAAGGGATGGCGGGAACGGGTAAAACCACATTGGCAACACAAGTGGGAAAGCAAGTTGAAGAATCCAAAGCATTTGAGAAAGTCATCTTTGTTGTTGTGTCCAGTTCTCCAAATGTCAACAAGATTCGAGGCGATATTGCAAGGCAATTAGGTTTGGATTTAGATCAAAGAATTGAAGCAGATCACTCAAAACATTTGTGGTCTAGAACTTCTGATAATGAAAAAAAGTTACTCATAATATTTGATGATGTGTGGGAGAAGCTGGATCTAACTGAACTTGGGATTCCATCTGGACCTGATCACAAGAATTGCTATGTTTTGATAACCACTCGTCATTCAAAAGTTTATCAGCAAATGATATGCCAAAAAGTAGTTCACCTACACACATTGGGTGACGAGGATGCAGTGCGTCTCTTTCTGTATCATGCTAGAAGTTGTGATGCTGATCATCCTTCAAGGAATGATTTAGAGGGCCTTGCACGAGCTTTTGTGAAGGAGTGTGGAGGATTACCAATTGCAATCGTGGCACTAGCTAGCACATTAAAAAATTGGCCTGTTGCTGAATGGACTGTGGCTTTGACAACTTTACGAGATAATAAGCCAATTGTTGATGTCGATGAAGAATTGGTGAATGTTTATAATTGCTTGAAATTAAGCTATGATAAATTAAATAATGAGAAGGCCCAAAAGCTTCTTTTATTGTGTTCTATATTCCCAGAAGATTATGAATTTCCCATAAATCTCATTATTAGAATTGGTATGGGGTCAGGAATTTTTGGGGAAGTTAACCAATATTGTGCAGCACGAAGCAAACCACTTGCAGTGAAAAATGAACTTATAGCTTCTTCTTTGCTACTGAAGGTTGAGAATAAAGAATGTGTAAAGATGCACGACTTGGTTCGTGAAGTAGCTCAATGGATAGCCAAGGATGATATTCAAGTGATTATGAATTCAAGAACAGCTTTTGAAGCAAGTAAGCGATTTGTGTTTTGGAGTATTGATGATTTTCCTGATCAATTTGATGGTACGAAGGTTGAGATTTTACTTCTTTGGATAAGTGAAAATGCTTTGAAAAAAGATGCAAATGCATTCTTTGCAAGGATGTCAAACCTCAAAATTCTGTTTTTGCTCGGTCAATATGACAGAAGAGTTCCCACTTCGTCATTTTCGCAATCACTTGCTTCATTAAAGAATATTCAAACTCTTATCTTGGATGGTTGCGAAATAGGAAACATTTCGGCTTTGAAGAATTTACAAGAAGCCATGTTTAAGTACCTTGTGCGAAGAGCAGAAGTTCTTGAGCTAGGGAACTTAGGACAAACAGGGTGGAAAAGTCTTATCCCTGACATTATTCCTGTGGAAGAGAGAGGCAAGGATAATTTAATCAAGCTTTACTTGTATGATTGGGCTGACATTGAGTGCCTTATTCATAGTAATAAGTGTCACTATTCTAATTTGTCATTCTTCTTCAACTTAGTTGAGTTACATCTGTGTAAAGTGGATGTGAAAGAATTATGTTGCGGTGCTATGCCTTCTAGGTTTCTTGAGAAGTTACAGATTTTAAGGTTAGAGGGTTGTAGGAAACTACAAAATATACTCTCAGATGAAAATCTCAAGCTACCTCATCTGAAGGTATTGAAATTGGAAGATTGTCCAATGTTCCAACCATCAATTTTCAAACCCTTTGTTGCTCGAAGTCTTGGGCAATTGGAAGAATTAATAGTTGAAGGTTTCACAGAGCTAAAAAATTTAATTGCAGACGAGAGTTTAGAAGAAGAAATGAGGATTGTTGATTATCAAAAACGTCATGGCTTATTGTTTCCCGCATTAGAGTCTCTTCAAATTGAAAGATGTGGCAAATTAGAAGTGGTATCATCATTTCTTCAAGCTGGAGACCTTCCCAAGTTGAAAGATTTAGGCATATATGATTGTGCGGAGCTAAAATACTTATTTGGTGAATATAACGATAATGTGGGCCAAGCTGGGCAACAGGAAATCATGCTCCCTTTACTAACACAAGTGAGACTTCAGAGAGTACCAAGTTTCATTAACATATTTAAAAAATGTAAGACATGTGTGCTAAGGCCGCCTCATATTTTGAAAGAAGATTCAAAGGAGAGACATAAGAACTCTAAGACAAGTGCTTTCTCATGGACTCATGGGTGTTGTTTTCTGGCTGCAACAAAAGACAGTAATATTGGAGTTTCTAATGCCCCCCTACTAGAAGACTGCACAATCTCACAGAAAGCTTATGAGCTGAAATATATTTTTGGAAAATACAATGATGGAGATTGTCAATCAAATGAGAATGAAAACAATGAGCCTCAGATTCATCTTCCAGCACTGGAAACACTATTCCTCGAAGGCGTACCAAATATGATGAGCATTGGTATCAAGAAACATCAGCTCGAACGCCCATCTCTACAGATTATAGAAGAGCCAAAGATAAACTGA 2964 0.3735 MACPGEGILTDLAKRLVDKTIKEVNYCRHFETHNHEFDEDNQLLRRRLEKVRKDIDDANINEHEVEGEFQDWIKKADKLIQMNAEVRQTRFDSYSFLRKYRQGKILARRAQVIKSHIQNYKNFEGVARPGKLPGMKYHASKDFIDFESRKTKFKELLDALEDGNHYMIGLQGMAGTGKTTLATQVGKQVEESKAFEKVIFVVVSSSPNVNKIRGDIARQLGLDLDQRIEADHSKHLWSRTSDNEKKLLIIFDDVWEKLDLTELGIPSGPDHKNCYVLITTRHSKVYQQMICQKVVHLHTLGDEDAVRLFLYHARSCDADHPSRNDLEGLARAFVKECGGLPIAIVALASTLKNWPVAEWTVALTTLRDNKPIVDVDEELVNVYNCLKLSYDKLNNEKAQKLLLLCSIFPEDYEFPINLIIRIGMGSGIFGEVNQYCAARSKPLAVKNELIASSLLLKVENKECVKMHDLVREVAQWIAKDDIQVIMNSRTAFEASKRFVFWSIDDFPDQFDGTKVEILLLWISENALKKDANAFFARMSNLKILFLLGQYDRRVPTSSFSQSLASLKNIQTLILDGCEIGNISALKNLQEAMFKYLVRRAEVLELGNLGQTGWKSLIPDIIPVEERGKDNLIKLYLYDWADIECLIHSNKCHYSNLSFFFNLVELHLCKVDVKELCCGAMPSRFLEKLQILRLEGCRKLQNILSDENLKLPHLKVLKLEDCPMFQPSIFKPFVARSLGQLEELIVEGFTELKNLIADESLEEEMRIVDYQKRHGLLFPALESLQIERCGKLEVVSSFLQAGDLPKLKDLGIYDCAELKYLFGEYNDNVGQAGQQEIMLPLLTQVRLQRVPSFINIFKKCKTCVLRPPHILKEDSKERHKNSKTSAFSWTHGCCFLAATKDSNIGVSNAPLLEDCTISQKAYELKYIFGKYNDGDCQSNENENNEPQIHLPALETLFLEGVPNMMSIGIKKHQLERPSLQIIEEPKIN 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3440g00028 987 SUPERFAMILY L domain-like 461 848 - -
Pral3440g00028 987 Coils Coil 34 68 - -
Pral3440g00028 987 Gene3D - 135 297 IPR027417 -
Pral3440g00028 987 PRINTS Disease resistance protein signature 683 699 - -
Pral3440g00028 987 PRINTS Disease resistance protein signature 167 182 - -
Pral3440g00028 987 PRINTS Disease resistance protein signature 337 351 - -
Pral3440g00028 987 PRINTS Disease resistance protein signature 241 255 - -
Pral3440g00028 987 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 967 - -
Pral3440g00028 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 403 IPR027417 -
Pral3440g00028 987 Gene3D - 299 394 IPR042197 -
Pral3440g00028 987 Gene3D Ribonuclease Inhibitor 504 870 IPR032675 -
Pral3440g00028 987 Pfam NB-ARC domain 151 391 IPR002182 GO:0043531
Pral3440g00028 987 FunFam Probable disease resistance protein At1g61300 138 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3440g00028 Pral-Chr3440 412860 418050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3440g00028 168 839 WRKY Transcription Factor Family AT5G45050 21.897 5.75e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3440g00028 - - pcin:129318075 768.459