Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3440g00018 ATGGGTTATCGGACCTATGTCAAGGAAAGAGAAGCTGATATCCCTGAATATTCATACAATTTCTTACCTATTTCTGAGATTATTGAGCTCACCCGACAGAATAACATTGATTATCTGATTGATGTTATTGGATTTGTCACCACCGTTGGATCTCTTGAAGAGTGCCATTTCAATTCTGAGACAAACAATAGGATACGCTTGACTTTATCTGATAACCTGGAAAATTCTGTTTCTTGTGTTTTGTATGATGAGTGTGCAACAAATGTGTGCATGACTGATTTTACTAAGATGGACGCCCCAGTGGTCATTCTCATTCAACTTGCAAGGATTGGTTTTGATGAGAAAGGGAAGGTAGAGATTTGTAGTGCTTTCCATGCAACTAAGATATCATTTAATATGAATTATCCAGAGGTTAGGCAATTTATTGAAAGTGCAAAGACATTTCCCTCTCCAACAATCAGTACGATATCTGCAAGTGTTGCATCTCAAACTTCCAATCCTTTTGAAAGCACTCTTCTTAGTAGTCACCCTTTAATTCCCATTGCTGATATACCAAAACAGAGTGTGGATGATTTTTTCCTGATTAAGTGTAAGGTTATCAAGCTAGAGACTACTCATGATTGGAAATATGAGGCATGTACAAGGTGCGGCTGTAAGCCAAAGGAAGAGGCTGGGAAGAAGACATGTTTGAGCTCAGTGTGTAGGAAGAGGCCATTGTATTTCGAGTGGAAGATGAGGGTGCATTATACAGTGGAAGATGAGTCAGGAAGAGTTGTTGTTGCGTTCTTTGACAAGCTGGTTAGAGAATTTGTTGGTAAAACTCTTGCACAATTGGAAGAGGAGCTTATCAAGAAGGAGCGTCACTATGATTTTCCTGAAGACCTGGACATTCTTGTTGGTAAGACACTACTATTGAAGCTGAAACTCAAGAAGTATAATGCTGAATTCCCAAATTCAAGCATTTCTGTATCTTCTTACACTCATATTGCGGATCTTATGGATGAATTTAACAAAGTTGGAGAGACAAGTGAATATGTTGCGGATAAGGATTCTCAGTATGTAATAGTTGATGAAGAGTTGACTGAGGGCAGTGTTGTCCCCGAGTCAGTACCATGTGTTACTAATGCCAGTATTGATTTTGAGTCTGTGACATGTGTTTCTGAGCCCAATATTATCCCCGACTCTGTGCAACATATTACTGAGGGAAGAAAGGAGGAGCATGCTGATCTAGATGAGGTCCCTTTATCTCAAATCAATCCAACAGCAACATATAAAGGAAAGAGAAAGATTGGTGCAAAAAAGAGTTCTGTTGTCAAATCCAAGGATGTGATTAAGTCCGACGTATCACCTGTGAAGAATGCTTGGAAACCTTTGAAGGCTATCAAACAGGAGAAGAACTGA 1401 0.3933 MGYRTYVKEREADIPEYSYNFLPISEIIELTRQNNIDYLIDVIGFVTTVGSLEECHFNSETNNRIRLTLSDNLENSVSCVLYDECATNVCMTDFTKMDAPVVILIQLARIGFDEKGKVEICSAFHATKISFNMNYPEVRQFIESAKTFPSPTISTISASVASQTSNPFESTLLSSHPLIPIADIPKQSVDDFFLIKCKVIKLETTHDWKYEACTRCGCKPKEEAGKKTCLSSVCRKRPLYFEWKMRVHYTVEDESGRVVVAFFDKLVREFVGKTLAQLEEELIKKERHYDFPEDLDILVGKTLLLKLKLKKYNAEFPNSSISVSSYTHIADLMDEFNKVGETSEYVADKDSQYVIVDEELTEGSVVPESVPCVTNASIDFESVTCVSEPNIIPDSVQHITEGRKEEHADLDEVPLSQINPTATYKGKRKIGAKKSSVVKSKDVIKSDVSPVKNAWKPLKAIKQEKN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3440g00018 466 Gene3D - 12 150 IPR012340 -
Pral3440g00018 466 CDD RPA1_DBD_B_like 41 144 - -
Pral3440g00018 466 SUPERFAMILY Nucleic acid-binding proteins 182 313 IPR012340 -
Pral3440g00018 466 Gene3D - 161 338 IPR012340 -
Pral3440g00018 466 Pfam Replication factor-A C terminal domain 192 311 IPR013955 -
Pral3440g00018 466 SUPERFAMILY Nucleic acid-binding proteins 18 145 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3440g00018 Pral-Chr3440 190741 200182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3440g00018 15 315 Core DNA Replication Machinery Family AT5G08020 22.364 4.74e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3440g00018 - K07466 pcin:129290097 283.108