Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3438g00004 ATGGCGCAACCATCTCCGTCTGATCTCATTTTCACAGTGAGAAGACAGAAGCCGGAGATTATATCGCCGGCAAAACCTACTCCTCATGAGATCAAGCCTTTGTCTGACTTAGATGACCAACATTTCTTACGCATGCAAATTTCACTCATACACTTTTATCGTCCTAAGCCTTCCATGGCAGGCAAGGAACCAGTCAAAGCCATCAGAGAAGCTTTGGCTCAGACACTTGTGTTTTACTATCCTTTTGCAGGAAGACTCAAGGAAGGTGGAGGTCGCAAGCTTATGGTGGATTGTAATGAAGAAGGTGTTATGTTCACTGAGGCTGATGCTGACGTCACGCTTCAGCAGTTCGGTGATGATCTTCACCCTCCATTTCCATGCCTTCAAGACCTCCTTCACTCTCCTCCTGGTTCTGATGAAATCCTTCACCGTCCAATCTTGCTTATTCAGGTGACACGCCTCAAGTGTGGTGGTTTCATCTTTGGTATTCGCGTGACTCATTGTTTATGTGACGGACCTGGAATAGTCCAATTCCTGAATTCCCTTGCTGAATTTGCTAATGGCGCAACCGAACCTTCGATCCAACCAGTGTGGCACAGAGAACTTCTAAATGCGAGAGACCCACCACGTGTTAGTTGCACTCATCATGAGTACGATGAAGAAGTGATCGACACCAAAAATCCATCCACAAACACCATTCTTCGATCTTTCTTCTTCGGACCTACTGAGATCTCTTCCCTCGGTAGATTACTCCCCGACCACCTGCGTCAATCCTCCTCATTTGAGGTTGTCACAGCTTGCCTTTGGCTTTGTCGAACAAGAGCTTTACAACTAGATCCACAAAAAGATGTTCGCATGATGATCGTTGTCAATGCACGTTTTGGACATAACAAACTAGACCCTCCATTACCTAAAGGTTATTATGGCAATGCTACTATGTTTCCAGCTGCAATTTCAACTGCTGGTAAGCTTTGTGAGAGTCCGTTGGGGTATGCTTTGGAGTTAGTGAAGAAAGCAAAGGCTGAAGTGGATGAGGAGTATTTGCGCTCCACAATTGATCTGATAGCTACGAAACGACCAAGATTATGTGGAATATTAAGATCATGTATGGTATCAGATTTGAGCTATCTTGGATTCGGAGATGTTGATTTTGGGTGGGGCAAAGCAGTGTATGCTGGTATTGCAAAGAATCCACTTGAGACATTTCAAGGATTAACTGCTTACGTTGGATATAAAAATAGTAAAGGAGAGGCAGGTAGGGTCGTGCCTATTTGCTTACCACAGGAATGCATGGAGAGATTTGCTAAAGAGTTGGATTGCTTACTTAACGGTGTCCCGCAGGAGATCCAAGAATCAACAAGTGTGATTGCTGAACTCTAA 1380 0.4457 MAQPSPSDLIFTVRRQKPEIISPAKPTPHEIKPLSDLDDQHFLRMQISLIHFYRPKPSMAGKEPVKAIREALAQTLVFYYPFAGRLKEGGGRKLMVDCNEEGVMFTEADADVTLQQFGDDLHPPFPCLQDLLHSPPGSDEILHRPILLIQVTRLKCGGFIFGIRVTHCLCDGPGIVQFLNSLAEFANGATEPSIQPVWHRELLNARDPPRVSCTHHEYDEEVIDTKNPSTNTILRSFFFGPTEISSLGRLLPDHLRQSSSFEVVTACLWLCRTRALQLDPQKDVRMMIVVNARFGHNKLDPPLPKGYYGNATMFPAAISTAGKLCESPLGYALELVKKAKAEVDEEYLRSTIDLIATKRPRLCGILRSCMVSDLSYLGFGDVDFGWGKAVYAGIAKNPLETFQGLTAYVGYKNSKGEAGRVVPICLPQECMERFAKELDCLLNGVPQEIQESTSVIAEL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3438g00004 459 Gene3D - 216 438 IPR023213 -
Pral3438g00004 459 Gene3D - 9 215 IPR023213 -
Pral3438g00004 459 PANTHER ACYL TRANSFERASE 4 11 439 - -
Pral3438g00004 459 Pfam Transferase family 13 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3438g00004 Pral-Chr3438 48092 49972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3438g00004 44 438 Monolignol Biosynthesis Gene Families AT5G48930 29.976 1.60e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3438g00004 K19861 - cave:132185407 559.296