Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3434g00001 ATGGTTGCTGAGTCAGTTCTAGTAGTTTCATGGATGAGAGTTCGAGTAGATGAAGCCGATGTCGTGAACGATGCTATGCTTGATGCTTTTGATGTTCATGAAAGTGAGGATCCCAACGAAGATGAAAAATCCATAAGTGAGACAAGAGAGGCAAAAAATGGAGATTTATTTTCCATATGGAATTATGATGGAAACATTGCATATAAAGATATCATTGAAGCAACAGAGGATTTTGACATCAAGTATTGTATTGGAACTGGTGCCTATGGAAGTGTTCATAGAGCACAGCTTCCTAGTGGCAAAATTGTGGAATTGAAAAACCTCCACAGAAGAGAATATGGAAACACATATCTTGCTAGGAGTTTTCATAATGAAGTGAAGATGTTAAGTGAAATTCGACATCACAATATTGTAAAGCTTCATGGTTTTTGTTTACATAATCAATGCATGTTTCTTGTCTATGAATACATGGAAAGAGGTAGCCTTTTTTATGTGTTGAATAATGATGACAAAGCTAAAGAGTTAGATTGGAGTGAGAGAGTAAATGCCATCAAAGGAATAGCAAATTCTTTGTTCTACCTTCATCATGAATGTGCCCTTGCAATTATCTATCAAGACATAACAAGTAGTAATGTGTTATTAAACTCAAAGATGGAGGCATTTCTATCTGATTTTGGCACAGCTAGAATCATTGATCCGGATACATCTAATCAAACTCTTCTAGTTGGTACTTATGGCCATGTTGTTGCAAAGCTTGCATACACCTTAGTTGTAAATGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGACAATGGAAACGGTCATGGGAAGACATCCTGGAGATTTGATATTATCTTTATCAAAGACATATTCTGAAAGCATTTGGCTAAAAGATGTGTTAGACCCATGTCTCCTACTGCCATCACAGAAAGATGTAAGAGATGTGACTTTTTTGTCACAATGGCATTAG 972 0.3601 MVAESVLVVSWMRVRVDEADVVNDAMLDAFDVHESEDPNEDEKSISETREAKNGDLFSIWNYDGNIAYKDIIEATEDFDIKYCIGTGAYGSVHRAQLPSGKIVELKNLHRREYGNTYLARSFHNEVKMLSEIRHHNIVKLHGFCLHNQCMFLVYEYMERGSLFYVLNNDDKAKELDWSERVNAIKGIANSLFYLHHECALAIIYQDITSSNVLLNSKMEAFLSDFGTARIIDPDTSNQTLLVGTYGHVVAKLAYTLVVNEKCDVYSFGVVTMETVMGRHPGDLILSLSKTYSESIWLKDVLDPCLLLPSQKDVRDVTFLSQWH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3434g00001 323 FunFam Leucine-rich repeat receptor protein kinase MSP1 40 156 - -
Pral3434g00001 323 Gene3D Transferase(Phosphotransferase) domain 1 157 319 - -
Pral3434g00001 323 Gene3D Phosphorylase Kinase; domain 1 39 156 - -
Pral3434g00001 323 FunFam Os07g0541700 protein 157 244 - -
Pral3434g00001 323 ProSitePatterns Tyrosine protein kinases specific active-site signature. 202 214 IPR008266 GO:0004672|GO:0006468
Pral3434g00001 323 Pfam Protein kinase domain 82 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3434g00001 323 PANTHER LEUCINE RICH REPEAT KINASE 2 15 312 - -
Pral3434g00001 323 SUPERFAMILY Protein kinase-like (PK-like) 61 286 IPR011009 -
Pral3434g00001 323 ProSiteProfiles Protein kinase domain profile. 78 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3434g00001 Pral-Chr3434 64991 73818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3434g00001 43 250 Receptor kinase-like Gene Family AT4G08850 48.585 2.43e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3434g00001 Pkinase 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3434g00001 - - pcin:129307102 432.565