Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3429g00025 ATGCCTTTGCTTTACTTCGGTCTGCTCGTTTTCGTTTCTCGCCTTCTTAATCTCACAGCCCAGCCTGATTTCCGAGCGTTCTATTGTTACCTAGGAGGAGGTAACGACACAGACAAAAGTGACTACCTGGCCAACCTCAAGACCCTTCTTTCTGGTTTCACTTCCGACAACACAAACATTGAATACGGCTTCATCAATTCCTCTTACGGCCAAAACCCTGACACCGTTCACGCATTTGGATTCTGCAGAGGCGATGTGAAACCAGATTCTTGCCGCAGTTGCCTCCTCAACGCCACAATCCTTCTCCCACGACTTTGTCCAAATCAGAAGGATGCAGTTGGATACTATGACGACTGCACGTTTCTATACTCATATCGTTCAATATATGGAATATACAACGTCTCTGATGTGATATGCCCTCTGTGGAACCTGGCAAGTTCAACGACACTTACGGATAACTACGTACAGGTACTATTGGACAAAGTAAAGAACCAAGCACCAATCGGGGATTCTCATCGTAAGTTTGCAGCAGCAAATGATAGTACCGGCGAATATAGGAAAGTGTATGCTTTTGCTCAGTGCAGTCCAGATCTGCCTGAGGATTATTGCAGGTCCTGCTTACAGGATGTTTCCCAACGAATCCAACTATGCTGTGAAGGAAAGAATGGTGGTAGGGTTCTCCATCCGAGCTGCTATATTAGATATGAGAGCTACCTCTTCTATGATTACACGGCTGTTTCAGCCCAGCCATCTCCTCCGCCATCCAGCCCCGTGACGCCGCCGCCCCAAGTTGGAGAAGAAGGTTTTAATCTGAGGTCCTTGCAATTTAGCTTAGCTACAATTGAAGCTGCAACAAATAAGTTTTCTGAAGAGAACAAAATAGGAAAAGGAGGATTTGGAGAAGTTTACAAGGGCACTCTTCCTGATGGACGAGAAGTTGCTGTCAAGAGACTCTCTAGAAGTTCAATGCAAGGAACATTAGAATTCAAGAATGAAATTTTGCTTATAGCCAAGCTCCAGCATAGAAATTTGATTCGGACAAGCAAAGATTATTCAATTGGTTTGAGCGGTTCAAGATCATTGGGGGAATAG 1092 0.4487 MPLLYFGLLVFVSRLLNLTAQPDFRAFYCYLGGGNDTDKSDYLANLKTLLSGFTSDNTNIEYGFINSSYGQNPDTVHAFGFCRGDVKPDSCRSCLLNATILLPRLCPNQKDAVGYYDDCTFLYSYRSIYGIYNVSDVICPLWNLASSTTLTDNYVQVLLDKVKNQAPIGDSHRKFAAANDSTGEYRKVYAFAQCSPDLPEDYCRSCLQDVSQRIQLCCEGKNGGRVLHPSCYIRYESYLFYDYTAVSAQPSPPPSSPVTPPPQVGEEGFNLRSLQFSLATIEAATNKFSEENKIGKGGFGEVYKGTLPDGREVAVKRLSRSSMQGTLEFKNEILLIAKLQHRNLIRTSKDYSIGLSGSRSLGE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3429g00025 363 Pfam Salt stress response/antifungal 34 124 IPR002902 -
Pral3429g00025 363 Pfam Salt stress response/antifungal 154 238 IPR002902 -
Pral3429g00025 363 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11 247 - -
Pral3429g00025 363 Gene3D Phosphorylase Kinase; domain 1 263 348 - -
Pral3429g00025 363 ProSiteProfiles Protein kinase domain profile. 288 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3429g00025 363 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Pral3429g00025 363 ProSiteProfiles Gnk2-homologous domain profile. 132 240 IPR002902 -
Pral3429g00025 363 Pfam Protein kinase domain 289 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3429g00025 363 Gene3D - 137 240 IPR038408 -
Pral3429g00025 363 Gene3D - 25 127 IPR038408 -
Pral3429g00025 363 ProSiteProfiles Gnk2-homologous domain profile. 24 128 IPR002902 -
Pral3429g00025 363 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 257 353 - -
Pral3429g00025 363 SUPERFAMILY Protein kinase-like (PK-like) 255 346 IPR011009 -
Pral3429g00025 363 FunFam Cysteine-rich receptor-like protein kinase 10 140 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3429g00025 Pral-Chr3429 1566578 1568939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3429g00025 37 346 Receptor kinase-like Gene Family AT4G23160 35.792 1.74e-63 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3429g00025 Stress-antifung 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3429g00025 - - pcin:129293776 447.973