LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3429g00020	ATGTCTCTGAACATGAAAACCCTAACGCAAGCCTTGGCTAAGACCGCGGCGGTCATCGAGAAGAAGGTTCAGACCACCGTGCAGGAGGTCACCGGACCCAAGGCTCTCCAGGACTACGACCTTCTTGATCAGATCGCGTCCGCTGGGCCTGGTCTCGCATGGAGGCTTTACTCGGCTAGGCCCAGGGAACCATCGCGGCAGCAACAGTACCCCCTTGTTTGTGTTTGGATCCTGGACAAGCGGGTGCTGTCGGAGGCGCGAATGCGTGCTGGGCTGACCAAGGCAGCTGAAGATTCGTTTTTGGATTTGATTCGGGCCGATGCGGGTAAACTGGTGCGATTGAGGCATCCCGGGGTAGTGCATGTAGTGCAAGCGTTGGATGAGAGCAAGAATGCTATGGCGATGGTGACTGAACCCTTGTTTGCATCGGTGGCTAATACTCTTGGGAACCTGGAGAATGTTGCGAATGTTCCTAAGGAGCTCAGGGGAATGGACATGGGACTGTTGGAAGTGAAGCATGGCTTACTTCAGGTAGCAGAATCACTGGACTTCTTGCACAACCATGCCCATCTTATTCATCGCGCGATATCACCTGAGAATATTCTTATCACTTCAAGTGGAGCTTGGAAACTTGGCGGATTTGGTTTTGCAGTTTCAGCAGCTCAGGCCTCTGGTGACTCGACTAATCTGCAAGCTTTCCATTATGCTGAATATGATGTCGAGGACTCTATTCTTCCACTACAGCCATCACTTAATTACACCGCTCCTGAGCTGGTTAAAAGCACTGTGTCATCAGCTGGGTGGGCTTCTGATATTTTCAGTTTTGGTTGCGTTGCTTACCATTTAATTGCTCGCAGGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACTCTGACTTACTTATCCAGTGACACATTCTCATCTATTCCACCGGAGTTGGTTCCTGACTTGCAGAGGATGCTATCTTCAAACGAGTCTTCAAGACCAACTGCAACGGCTTTTACTGGGTCCCCCTTTTTTCGGAATGACACTAGGTTGCGTGCTCTGCGCTTCCTTGACCATATGCTTGAAAGAGATAACATGCAGAAGACAGAATTCTTAAAAGCTTTGTCAGACATGTGGAAAGATTTTGACAGCCGTGTATTGCGGTACAAGGTCCTTCCGCCTCTCTGTGCTGAGCTTAGGAATGTGGTGATGCAGCCAATGATTCTTCCTATGGTTCTAACTATTGCGGAGTCTCAGGATAAAAGTGATTTTGAGATTACAACTCTTCCAGCACTTGTTCCTGTCTTGAGTGCTGCAGCTGGTGAGACATTGTTGCTGCTTGTGAAGCATGCAGAGCTTTTAATAAACAAGACTAGTCAGGATCATTTAGTTTCACATGTTCTGCCAATGGTTGTTCGGGCTTTCGATGAGAATGATGCTCGTGTTCAAGAAGAGGTTCTGAAGAAATCTGTATCCCTTGCTAAGCAACTTGATACCCAGCTGGTCAAACAAGTGGTTTTGCCTCGTGTTCATGGTTTAGCGCTTAAAACGACAATTGCTGCGGTTAGAGTCAATGCCTTGCTGTGCTTAGGAGACATGGTTATCCGACTTGATAAACCTGCTGTCCTAGACATCTTGCAGACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCTACCCTTATGTGTACACTTGGGGTTGCAAATGCTATTTATAAGCGGTATGGAGTAGAGTTTGTTGCTGAGCATGTGCTTCCTTTGGTTATACCCCTCCTGACAACTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTGAAGGATATGCTAAGGATGATAGAGGAGAAGCGAGGAGTGGTTGTGACACAGTCTGGAATCCCTGAGGTCACCAAACCATTTCCTCCAATTAATGGTCTTCACAATGAAGCCACTGCTAAAACAAACAGCACTGTTGCTTCAACCAAGAGCAGCTCTTCTTGGGATGAAGATTGGGGTGGCACTATGAAAGGGAGCACCACTTCTTCCCAAAGTTTTACTGACAAATCAAGTCAACCTGTGCCAGGAATCCCAATGGGTCAAATAACATCCTCACAGCAACATTCATCCTCATCTGCTGTGTCTAATCAGCAGGCTACAATTTCATGCCCCTCAGTCGATATAGAGTGGCCTCCTCGTGCTTCTGCTGCTGGTAACCAATATTTAGGTGATTCTGAGAGTCACATGAAGACAACAGGAACGTCTTCTACGTCTACTCTTGATGACATTGATCCTTTCGCTAATTGGCCTCCACGTCCTAGCAGCTCACTAGGTGGACCTGGAAGTTCCAACAATGGTGCTTCAGGACCTCCACTAGACAAAAATGGACCTAGTTTAATGTCAAACGCTTCAAACGCTAGGAATAATCAAACTACCAATAGTTGGTCTTTTAAAACCCCAAGTTCAGAAGATCCAATTGGTTTGAGCCTTGGTAATTCCAGTTCAACCACTGGTAGTCTGCATGGTGGTATAAAATCGCAGAACTCTCTTGCGTACTTAAAGCAGAGTCAGGGATTTCCAGCATCCAATGTTCCACAGACAGAGAACAAGTCCACAGATCTTGGATCCATCTTTGCTTCTGATCAGAATGACCTGATTGCACCTAAGCTTGCACCACCGCCCTCAACTGCCGTGGGCAGAGGTAGAGGAAGAGGAAGAGGAAGAGGGAGGGGAGCTGGTTCAAGCATGAGGTCCGCTCATCCCAAGTCTGAGGAGCCACCCCTTATGGATTTGTTGGGATAG	2787	0.4726	MSLNMKTLTQALAKTAAVIEKKVQTTVQEVTGPKALQDYDLLDQIASAGPGLAWRLYSARPREPSRQQQYPLVCVWILDKRVLSEARMRAGLTKAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNLENVANVPKELRGMDMGLLEVKHGLLQVAESLDFLHNHAHLIHRAISPENILITSSGAWKLGGFGFAVSAAQASGDSTNLQAFHYAEYDVEDSILPLQPSLNYTAPELVKSTVSSAGWASDIFSFGCVAYHLIARRPLFDCHNNVKMYMNTLTYLSSDTFSSIPPELVPDLQRMLSSNESSRPTATAFTGSPFFRNDTRLRALRFLDHMLERDNMQKTEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKSDFEITTLPALVPVLSAAAGETLLLLVKHAELLINKTSQDHLVSHVLPMVVRAFDENDARVQEEVLKKSVSLAKQLDTQLVKQVVLPRVHGLALKTTIAAVRVNALLCLGDMVIRLDKPAVLDILQTIQRCTAVDRSPPTLMCTLGVANAIYKRYGVEFVAEHVLPLVIPLLTTQQLNVQQFAKYMLFVKDMLRMIEEKRGVVVTQSGIPEVTKPFPPINGLHNEATAKTNSTVASTKSSSSWDEDWGGTMKGSTTSSQSFTDKSSQPVPGIPMGQITSSQQHSSSSAVSNQQATISCPSVDIEWPPRASAAGNQYLGDSESHMKTTGTSSTSTLDDIDPFANWPPRPSSSLGGPGSSNNGASGPPLDKNGPSLMSNASNARNNQTTNSWSFKTPSSEDPIGLSLGNSSSTTGSLHGGIKSQNSLAYLKQSQGFPASNVPQTENKSTDLGSIFASDQNDLIAPKLAPPPSTAVGRGRGRGRGRGRGAGSSMRSAHPKSEEPPLMDLLG	928

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3429g00020	928	Gene3D	-	348	620	IPR011989	-
	Pral3429g00020	928	SUPERFAMILY	ARM repeat	312	607	IPR016024	-
	Pral3429g00020	928	Gene3D	Transferase(Phosphotransferase) domain 1	147	347	-	-
	Pral3429g00020	928	ProSiteProfiles	Protein kinase domain profile.	39	344	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3429g00020	928	CDD	PK_SCY1_like	45	346	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	854	874	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	854	928	-	-
	Pral3429g00020	928	Pfam	Protein kinase domain	110	344	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3429g00020	928	SUPERFAMILY	Protein kinase-like (PK-like)	37	348	IPR011009	-
	Pral3429g00020	928	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	38	909	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	635	837	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	770	837	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	735	758	-	-
	Pral3429g00020	928	MobiDBLite	consensus disorder prediction	644	719	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3429g00020	175	349	MAP Kinase Kinase Kinase	AT3G13530	28.889	1.14e-09	60.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL2	Pral3429g00020		Pkinase	5e-24	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3429g00020	K17541		-	gmx:100796211	1316.98