Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3428g00001 ATGAAAACTACAGGTTGTGCTTTAATCAAAGATATCAATGATAGCAATGATACATTGCCAATTGAGGCTTGGGTACTAAGAAAATGGTTTGTCCTTGAGAAGGCTCCTCCACAGGCAATATGGAAGGTCGGGATGATTCTTGTCAATGGGCAGAGAAATCTAATCCAGCGTTATGAAACGTTTCCAGTGGAAGGAGTTGTCTATCACTTTGAAAATTTTAAGGTGCTTGAAAATACTAATTACTACAAAGTAACTGCGCACCCGTACAAATTGAGCTTCCACAATAGCACATACTGCAAGGAATGTGATGCTCAGATCCCATCGAATGCATTTAACTTTGTACCTTTAAGGGATATTGCTAACTACAAGGCTTCAAATCCAGAATTAATAGATGTTATAGGATTTCTGAATTCATTCGGGAATCTTTATGATCAAAGACGTGAATATGATGTGGTCAAGAGGTTGAACTTCACAATTTCGGACAAGGAGAAAAATGATGTCTGTGTAGTACTCTTTGGCAATTGTGCAAGTGTGACATTCAATAGTAGAACGCACGATTTGAAATCTCCCATAGTTGTTCTAGTCTGCTTTGCAAAAATTAATTTTACCACAGGATATGGCCACATAAGCAATGTCTTTGACGCCATTAAAGTGATTTTTAACCCGGACATTCCTGAGGCCAAGATTCTTATCAACAGTCTCAATAGTGACCCAACCAAAATTGGGATGTTCCTTCTAATTACAAGAAATGGATATCGTCACAAAGGTCACCATACAAAAGGTGGAACAGCATATGGTTGGAAATACGACGGATGCAAGTGTGATGCTAAGCCCCAACAAGATAAGGAAAAGCTTTTTTGCAAAAAGCGTTGTCAAGCCATAAATGAGACACACCCCAAATTCAAGGTTCATTATAAGGTGTATGATTCCAACAGAAAGTGTTCAGTTATTTTTTTCAATCGCCTTGCTAAAGAACTTCTTGGAACCACCACTGAAATTCAGGCCAAGAAATTGGAGAAGGAGACCACATTTTCATTTCCAAAGGACTTGGAGAATTGTGTTGGGAAAGAGTTAGTGGTAAGACTGAAGGGCTCAAGTGATGAACCAAAGAAGGTCAAATATTCAAAAGAAACATCTACTGAGGAGAACAGATTGAACAAAGACAGTGCTCGGGCTTCTGCACCAAGAAACCTGACAATAGATATGGATCAAGATCGAATAGAAGAAGTGGAAGCACCTAATCTTTCTGCACCAACAGTAGCATCTAGACGGGGATGCAAGAAATTAAAGAAGGAAGAATAA 1302 0.3886 MKTTGCALIKDINDSNDTLPIEAWVLRKWFVLEKAPPQAIWKVGMILVNGQRNLIQRYETFPVEGVVYHFENFKVLENTNYYKVTAHPYKLSFHNSTYCKECDAQIPSNAFNFVPLRDIANYKASNPELIDVIGFLNSFGNLYDQRREYDVVKRLNFTISDKEKNDVCVVLFGNCASVTFNSRTHDLKSPIVVLVCFAKINFTTGYGHISNVFDAIKVIFNPDIPEAKILINSLNSDPTKIGMFLLITRNGYRHKGHHTKGGTAYGWKYDGCKCDAKPQQDKEKLFCKKRCQAINETHPKFKVHYKVYDSNRKCSVIFFNRLAKELLGTTTEIQAKKLEKETTFSFPKDLENCVGKELVVRLKGSSDEPKKVKYSKETSTEENRLNKDSARASAPRNLTIDMDQDRIEEVEAPNLSAPTVASRRGCKKLKKEE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3428g00001 433 MobiDBLite consensus disorder prediction 369 389 - -
Pral3428g00001 433 SUPERFAMILY Nucleic acid-binding proteins 267 370 IPR012340 -
Pral3428g00001 433 MobiDBLite consensus disorder prediction 369 433 - -
Pral3428g00001 433 CDD RPA1_DBD_A_like 25 97 - -
Pral3428g00001 433 Gene3D - 105 241 IPR012340 -
Pral3428g00001 433 Gene3D - 256 388 IPR012340 -
Pral3428g00001 433 SUPERFAMILY Nucleic acid-binding proteins 111 239 IPR012340 -
Pral3428g00001 433 Pfam Domain of unknown function DUF223 51 121 IPR003871 -
Pral3428g00001 433 SUPERFAMILY Nucleic acid-binding proteins 8 103 IPR012340 -
Pral3428g00001 433 Gene3D - 6 104 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3428g00001 Pral-Chr3428 12397 14654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3428g00001 106 237 Core DNA Replication Machinery Family AT5G61000 27.941 3.73e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3428g00001 - - pcin:129301944 229.565