Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00023 ATGGCTACCATTGCATCAAGCATCTACCTTCTGTTTTTGGTATATTTTCTATGTGAAACAGTGGTATTCGCAGAACCCATACCCCTTGGCTCGTTCCTTTCCCCTCCCAATTCATGGTCTTCACACTCTGGTCAATTTAAATTTGGGTTTTACAATCAAAGCAGCGGCTTCAAAGTTGGAATCTGGTTACTTGATGGGACTAATAAAACAATAGTCTGGACTGCAAATCGCGATGACCCTCCTGTTTTCCCAAATGCAAAGCTTGTTCTAACCAAGAGAGGTGAGCTTTCTCTACAGGCAGGTCAAGGGCAACAGAAGGTTATTGCTCACAGTAACAATGGAACTGTTTCCTCTGCTTCCATGCTTGATTCTGGAAACTTTGTTCTACGAAACAAAAGTTCACACATCCTTTGGCAGAGTTTCGATTACCCAACTGATACCCTCTTAGGGGGTCAAACTCTACCTTGTGGGAGTCAATTGGTATCGAGTTCATCAGACACCAACCAATCTTCTGGAAGGTTTCAACTCTGGATGCAGGCTGATGGAAACCTTGTTCTGTACCCACGATATTCTGGTCGTACAGCTTCTGATGCTTACTGGGCATCTGGTACTTACCATGGCAGAAGTTTCAAATATAATCTTTTCCTCAACAACACAGGTCCTCAGCCTCTATGCATTGTAAATGCTAGTAGTTCCAACTCAGCGATAGTCTGGTGCGAGGATTATAGCAGCTTCAAAGGAAACAATACTATTTATCGCGCAACTATTCATTCTGATGGAGTTTTACGACTCTATGCTCATTTTGAAGACGCACATGGGAAACACCAAGTTATAAAGTTGTGGTCACCACAAGGGTTGGACAATCAGTGCAACTTGAAGACATTTTGTGGGTTCAATAGCTATTGTACCATTAATGACATAGAGCCAGGTTGCAATTGTCTTCCCGGAACTGATTTTATAGATCCAAGTCATAAGAATCTTGGATGCAAAAGGAACTTCTTAGAAGCAGAATGTAAAGGTGGGAAAGATAATGCTACTTTTTATTACATGTCCCCAATGAAAAGTATGAAAACCGATGATCTTCCTTATACAGTGGAAGACATTCTGGAGGAGGAATGCCTATCATCTTGTTTGCAAGATTGTTACTGCGGGGCTGCCTTCTATGAAGATAATTGGTGCAAGAAAGAAAAGCTTCCATTCAGATATTTTACAAGAGAACCAGGGTCTTCCCTCACAATATACTTCAAGGTGGGCAATGTAAGCCTCAAAGGAAACAGTACGTCTTCCATCAAGAAAACCAGTAAGAGAGCAATTCTTCTTATCATTGTTGTCATCTTAGGTTTTGCTATTCTTTTATGCTTAGCTATTGCAGTCTCTAGCCGATTTATATACAAGATTGGAATTTTAAGTTACAAGAGGTTGTTGGAGATAGGAGATTTGGACTTGAATGAAGGGATTACACTGAGGGTATTTTCCTACAATGAGTTGAAAAAAGCAACGAATGGTTTCAAACAAGAGGTGGGTAAGGGTTCCTTCGGATCAGTTTATAGAGGAACTTTGCACAAAGGAAAAAAATTGATTGCAGTAAAAAGGCTACAAAAGTTAATTGAAGAAGGAGAGAGAGAATTTCAAGCTGAAATGCAGGTCATTGGAAAAACCCACCACAAAAACTTAGTTCGCTTGTTGGGATATTGTGCTGAGGGGTCCAAAAGGCTTTTAGTTTATGAGTACATGAGTAATGGCTCCCTTGAGAAGCTTATCTTTGGTCATAGCACTATACGTCCAGATTGGGATCAGAGAAGAAGAATAGCACTGGACATTGCAAGAGGCTTACTATATCTGCATGAACAATGCAGGGTTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTTTTGACAGCTAAAATATCAGACTTCGGGTTAGCCAAACTTCTAATGCCGGATCAAACTAGAACCTTCACTCAAGCTAGAGGGACAAGAGGTTATTTGGCTCCGGAATGGAGTAAGAACACTCCAATAACAGTAAAAGCAGATGTTTATAGCTATGGAATTATGTTACTGGAGATTGTATTTTGCAGAAGAAGCTTAGTGGTCAATATGTCGAATCCGGAGCAAATTGTTCTGTCCAACTGGGTGTACAAGTGCTTTGCTCGACGAGAGCTAAACAAGCTGGTTGTTGGGGAAGAAGTGGATAATAGTTTACTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCCATGAAGAGTGTGGTGTTGATGCTTGAGGGAGTTAGGGAAGTGGCTATTCCTCCTTGTCCATCTCCTGATTCTATTTGA 2361 0.4087 MATIASSIYLLFLVYFLCETVVFAEPIPLGSFLSPPNSWSSHSGQFKFGFYNQSSGFKVGIWLLDGTNKTIVWTANRDDPPVFPNAKLVLTKRGELSLQAGQGQQKVIAHSNNGTVSSASMLDSGNFVLRNKSSHILWQSFDYPTDTLLGGQTLPCGSQLVSSSSDTNQSSGRFQLWMQADGNLVLYPRYSGRTASDAYWASGTYHGRSFKYNLFLNNTGPQPLCIVNASSSNSAIVWCEDYSSFKGNNTIYRATIHSDGVLRLYAHFEDAHGKHQVIKLWSPQGLDNQCNLKTFCGFNSYCTINDIEPGCNCLPGTDFIDPSHKNLGCKRNFLEAECKGGKDNATFYYMSPMKSMKTDDLPYTVEDILEEECLSSCLQDCYCGAAFYEDNWCKKEKLPFRYFTREPGSSLTIYFKVGNVSLKGNSTSSIKKTSKRAILLIIVVILGFAILLCLAIAVSSRFIYKIGILSYKRLLEIGDLDLNEGITLRVFSYNELKKATNGFKQEVGKGSFGSVYRGTLHKGKKLIAVKRLQKLIEEGEREFQAEMQVIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLEKLIFGHSTIRPDWDQRRRIALDIARGLLYLHEQCRVPIIHCDIKPQNILMDEFLTAKISDFGLAKLLMPDQTRTFTQARGTRGYLAPEWSKNTPITVKADVYSYGIMLLEIVFCRRSLVVNMSNPEQIVLSNWVYKCFARRELNKLVVGEEVDNSLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVREVAIPPCPSPDSI 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00023 786 ProSitePatterns Protein kinases ATP-binding region signature. 507 530 IPR017441 GO:0005524
Pral3421g00023 786 FunFam Putative receptor-like protein kinase 578 777 - -
Pral3421g00023 786 CDD STKc_IRAK 507 771 - -
Pral3421g00023 786 FunFam S-receptor-like serine/threonine-protein kinase 477 577 - -
Pral3421g00023 786 Gene3D Transferase(Phosphotransferase) domain 1 578 776 - -
Pral3421g00023 786 Pfam D-mannose binding lectin 70 154 IPR001480 -
Pral3421g00023 786 Gene3D - 145 291 - -
Pral3421g00023 786 Pfam Protein kinase domain 504 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00023 786 SMART blect_4 30 144 IPR001480 -
Pral3421g00023 786 Gene3D Phosphorylase Kinase; domain 1 480 577 - -
Pral3421g00023 786 FunFam Serine/threonine-protein kinase 144 277 - -
Pral3421g00023 786 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Pral3421g00023 786 Gene3D - 22 143 IPR036426 -
Pral3421g00023 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pral3421g00023 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 782 - -
Pral3421g00023 786 PIRSF SRK 1 786 IPR024171 GO:0004674
Pral3421g00023 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 166 266 IPR036426 -
Pral3421g00023 786 SMART serkin_6 501 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00023 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 207 IPR036426 -
Pral3421g00023 786 CDD B_lectin 39 144 IPR001480 -
Pral3421g00023 786 ProSiteProfiles Bulb-type lectin domain profile. 145 277 IPR001480 -
Pral3421g00023 786 SUPERFAMILY Protein kinase-like (PK-like) 486 770 IPR011009 -
Pral3421g00023 786 ProSiteProfiles Protein kinase domain profile. 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00023 Pral-Chr3421 380692 383101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00023 472 781 Receptor kinase-like Gene Family AT1G66980 41.433 6.03e-68 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3421g00023 Pkinase 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00023 - - pcin:129309635 1061.98