Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00022 ATGGCGGCTTCCGTAACTCTGTTCTTGCTCTTCGCAGTGCTTTCTGCAAACCAAGTTATAGCTGAAACCAATGATACCACCGTCATCCGTTTGGGTTCTTGGCTCTCCCCAAAATCAAATTCCACTTCATGGGCGTCACCTTCTGGTCATTTCGCCTTCGGCTTTTATCCGCAAGGTAAAGGCTTTGTTGTTGGAATATGGCTGAGCCATGAACCTGAGAATATCACTGTATGGACGGCTTATCGCAACAGGCCACCATTATCATCAGATTCTGTGATCGAGTTAACTAAAGACGGCCTAGTTCTGCTTAAAGACACAGGGATAAAAGGATCCATTACTAATGCGTCATTTGCAGGGCGTGCACATTCAGCGTCTATGCTTGATTCGGGCAATTTCGTGATTTATCATAAGAATCGAAGTGTTATCTGGCAAAGCTTCGATCTCCCCACTGACACCATATTAGGAGGTCAAACTTTATCTCCTCAACAAAATCTGGTCTCTTCTTTGTCCAAATCCGACCACTCGAGTGGAAACTTCATTCTCATCGTGCAGGATGATGGGAATCCTGTGGCCCACCCTGTGAACAATCGAAGGAGAGATGATGCTTACTATGCCCCCATGGCTTCTGTGTATGTCTCGCTTACTCTTAATCTTACAGGCTTTCTTTGCTTGGTTGATGGAAGAAATACTACTTTAAGGGTTCTGGGGCATAGTAACATTACTGGGTATAACACAAGCCTAGTCTACCGTGCAACACTTGATGTGGATGGGATATTTAGATTGTATGTGCACAGACTTGAGAGGAATGCCAAATCAACTGTCTATATTGTGGCGCGTAATCTTCTTGATCAATGTGATTTCAAAAGTTTTTGTGGCTTCAACAGTTATTGTTCCTCCATCTCTGGCAAAGGTGTTTGTCATTGTTATCCTGGATTCACACCCATCAATAATGTGAATGAAAGCATGTTTTTGGACTGTGAACCAACCAGCAAATATGACTGTAAAACTAGTAAAGATACAAAGATGGTATACAATGTTAGTAATCCATTCAAACATATGGAATGGGGTCTTATTCCTTATTTGGCCATGTCCATGGAAATAGAAGCTTGTGGGAAGTCTTGCAATGAAGACTGTGATTGTGGGGCAGCGTTATATGATGAAGGAATCTGCAAAATGTTTAGCCTTCCGCTTAGATTTGGCAGAATTAATCATAATGTATCAACGACAGCCTTCTTCAAGTTGCCTTCAACGAATAAGATTCCTCTACTAAATGTAAAGAAGCCAGAGGTTCTTGTTGATGACAAGAAAAATCTGATTTTTACTCTGGTTATCATTCTAGGTACGATTTTATTCTTCTGTTTGGTCTTTGCAATATCTAGTTTCTTCATTTATATCCGTAAAGTCTATTCATACGCAAAGCTCTCCACTAGTAGCGAAAATTTGGGTTTCGTTGAGGATTGTGGTTTGCGACCTTTTGCCTTTGATGAATTGGCAAACGCAACGGGAAATTTCACAGAAGAGATTGGTAGGGGATCTTTTGGGATGGTTTACAAAGGTACAATTGGAGAAAGCAACAGAAGGATTGCAGTGAAGAAACTAGACATTGTCATTGATGGAGGAGAAAGAGAATTTCAAGCTGAAATCACTGCAATTGCTAGAACTCATCACAGAAATCTGGTTCAACTCATTGGTTATTGTATCGATGGTTCAAGAAAGCTTCTTGTTTATGAATACATGAGCAATAGATCTCTGGCAGATTTTCTGTTCAAGGCTGAGATGCATTTATCTTGGAAACAAAGAGTCAAAATTGCATTGGATATAGCAAGAGGAATCCTATATCTGCATGAAGAATGTGAAGTTTGTATTGTCCATTGCAATATCAAGCCTCAAAACATCCTCTTGGATGAAATGTGGACAGCAAAAATATCTGATTTTGGACTTGCAAGGCTATCATCAATACCAGAACATTCAAGAATCAGAAGTATCAATGAATTAACAAGTGGCTATGTGGCACCTGAACGGCAAAAAGATGCATCGACATCTATAAAAGTTGACATTTACAGCTATGGCGTGGTGCTGTTAGAGATCATATGTTGCAGAAGGAATATAGATGTGAATGTTCCTTCGGAAGAGGAAATTATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAGAGGGGAATTGAAGAAACTTGTATTAGTGGATGAAGATGTGGAATGGATGACATTAGAAAGAATGGTGAGGGTGGCGTTATGGTGTGTCCAAGAGGACTTGTCTCTACGTCCTTCCATGAAGAATGTGATACTGATGTTGGAAGGGTTGAAACATATTCCGATTCCTCCATCTCCAATCCCACTTGCTTGA 2364 0.4044 MAASVTLFLLFAVLSANQVIAETNDTTVIRLGSWLSPKSNSTSWASPSGHFAFGFYPQGKGFVVGIWLSHEPENITVWTAYRNRPPLSSDSVIELTKDGLVLLKDTGIKGSITNASFAGRAHSASMLDSGNFVIYHKNRSVIWQSFDLPTDTILGGQTLSPQQNLVSSLSKSDHSSGNFILIVQDDGNPVAHPVNNRRRDDAYYAPMASVYVSLTLNLTGFLCLVDGRNTTLRVLGHSNITGYNTSLVYRATLDVDGIFRLYVHRLERNAKSTVYIVARNLLDQCDFKSFCGFNSYCSSISGKGVCHCYPGFTPINNVNESMFLDCEPTSKYDCKTSKDTKMVYNVSNPFKHMEWGLIPYLAMSMEIEACGKSCNEDCDCGAALYDEGICKMFSLPLRFGRINHNVSTTAFFKLPSTNKIPLLNVKKPEVLVDDKKNLIFTLVIILGTILFFCLVFAISSFFIYIRKVYSYAKLSTSSENLGFVEDCGLRPFAFDELANATGNFTEEIGRGSFGMVYKGTIGESNRRIAVKKLDIVIDGGEREFQAEITAIARTHHRNLVQLIGYCIDGSRKLLVYEYMSNRSLADFLFKAEMHLSWKQRVKIALDIARGILYLHEECEVCIVHCNIKPQNILLDEMWTAKISDFGLARLSSIPEHSRIRSINELTSGYVAPERQKDASTSIKVDIYSYGVVLLEIICCRRNIDVNVPSEEEIMLSSWVYNCFVRGELKKLVLVDEDVEWMTLERMVRVALWCVQEDLSLRPSMKNVILMLEGLKHIPIPPSPIPLA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00022 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 782 - -
Pral3421g00022 787 CDD STKc_IRAK 508 774 - -
Pral3421g00022 787 Gene3D - 150 276 IPR036426 -
Pral3421g00022 787 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Pral3421g00022 787 Gene3D - 27 148 IPR036426 -
Pral3421g00022 787 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00022 787 Gene3D Phosphorylase Kinase; domain 1 467 578 - -
Pral3421g00022 787 SMART blect_4 35 149 IPR001480 -
Pral3421g00022 787 FunFam S-receptor-like serine/threonine-protein kinase 471 578 - -
Pral3421g00022 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Pral3421g00022 787 Pfam Protein kinase domain 505 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00022 787 FunFam Putative receptor-like protein kinase 579 778 - -
Pral3421g00022 787 ProSitePatterns Protein kinases ATP-binding region signature. 508 532 IPR017441 GO:0005524
Pral3421g00022 787 Pfam D-mannose binding lectin 76 162 IPR001480 -
Pral3421g00022 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 192 IPR036426 -
Pral3421g00022 787 Gene3D Transferase(Phosphotransferase) domain 1 579 777 - -
Pral3421g00022 787 SUPERFAMILY Protein kinase-like (PK-like) 487 773 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00022 Pral-Chr3421 376039 378604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00022 417 787 Receptor kinase-like Gene Family AT5G10530 34.715 1.17e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3421g00022 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00022 - - pcin:129308930 822.772