Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00021 ATGGCAGTTGTCAACTACTCCAAAGATATCAACTTCAACTTCTCCAAAGGGAACAACGCTATTTGTCGTGCAACTATTGATTTTGATGGAGTTTTACGAATCTACGCTCATTTTGACGACGCAAATCAGAAACATCAAGTTAAAAAGTGGTGGTCACCGCCATCCTTGGACAATCTTTGTCATGTGAAGACTTTTTGTGGGTTCAACAGCTATTGTACCTACAATGACAACCAACCTAATTGCAATTGTCTTCCCGGGACTGATTTTATAGACCCAAGTCATACGAATCTGGGATGCAAAAGGAACTTCTCAGAAGCTGAATGTGAAGGTGGGAAAGATAATGCAACTTTTTATTTCATGTCCCCCCTGGAAGATATAAGCGTGGATGGTGATCTTGACCTTCCTTATGCAGACGAAGACATTATGGAGAAGGAATGCCCAAATTCTTGTTTGCGAGATTGTTACTGCGGGGCTGCCTTTTATGAAAACAATCGGTGCAACAAATATAAGCTTCCATTGAGATATGCCAGAAGAGAAAATCTATCCTCCTACTCCACAATATATTTCAAGGTGGGACATCAGAGCCTCAAAAGCAACAGAGACAACCAGCCACCTTCGATCAAGACTGACAGTAAGAAAGCAATTAAGATGATCATTCTCATTGTCTTGGGTTTTGCTATTCTTTTGTGTTCAGCAGTTGCTGTCGCTACCCGGTTTATATACAAGATTGGAGTTTTAAGTTACAAGAGGTTGTTGGAGATTGGAGATTTAGGAGTGACCGAAGGGAGTACTCTGAGGGTATTTTCATACAGTGAGCTGAAGAAAGCCACACACGGTTTCAAACAACAGGTGGGTAAGGGTTCCTTCGGATCAGTTTACAGAGGAACTTTACACAAAGGAAGAAAATTGATTGCTGTGAAAATGCTACACAAGTCAATCGATGAAGGAGAGAGAGAATTTGAAGCTGAAATGCAAGCCATTGGGAAAACACACCATAAAAACTTAGTTCGCTTGCTGGGATATTGTGCTGAGAGATCTAAAAGGCTTCTGGTTTATGAGTACATGAGCAATGGCTCCCTTGAGAAGCTTATCTTTGGTGACAGTACTATGCGTCCAGATTGGGATCAGAGAAGAAGAATAGCACTAGACATTGCAAGAGGGTTGCTATATCTGCATGAAGAATGCAGGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGATTTTCACAGCTAAAATATCAGACTTTGGGTTGGCTAAACTTCTGATGCCGGATCAAACAAGAACCTTCACTCAAGTTAGGGGCACAAGAGGTTATTTGGCTCCAGAATGGAATAAGAACACTCTAATAACAGTGAAAGCAGATGTTTATAGCTATGGAATAATGCTGTTGGAGATTGTATTTTGCAGAAAAAGCCTAGTGGTTAATATGTTGAATCCAGAGCAAATTGTTCTGTCCAACTGGGTGTACAAGTGCTTTGCTCGACGAGAACTAAACAAGCTGGTTGTTGGGGAAGAAGTGGATAATAGCTTACTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCAATGAAGAGTGTGGTGTTGATGCTTGAGGGAGTTACGGAAGTGGCTATTCCCCCTTGTCCATCTTCTGATTCTATTTGCTAG 1695 0.413 MAVVNYSKDINFNFSKGNNAICRATIDFDGVLRIYAHFDDANQKHQVKKWWSPPSLDNLCHVKTFCGFNSYCTYNDNQPNCNCLPGTDFIDPSHTNLGCKRNFSEAECEGGKDNATFYFMSPLEDISVDGDLDLPYADEDIMEKECPNSCLRDCYCGAAFYENNRCNKYKLPLRYARRENLSSYSTIYFKVGHQSLKSNRDNQPPSIKTDSKKAIKMIILIVLGFAILLCSAVAVATRFIYKIGVLSYKRLLEIGDLGVTEGSTLRVFSYSELKKATHGFKQQVGKGSFGSVYRGTLHKGRKLIAVKMLHKSIDEGEREFEAEMQAIGKTHHKNLVRLLGYCAERSKRLLVYEYMSNGSLEKLIFGDSTMRPDWDQRRRIALDIARGLLYLHEECRAPIIHCDIKPQNILMDEIFTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTLITVKADVYSYGIMLLEIVFCRKSLVVNMLNPEQIVLSNWVYKCFARRELNKLVVGEEVDNSLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTEVAIPPCPSSDSIC 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00021 564 SUPERFAMILY Protein kinase-like (PK-like) 263 547 IPR011009 -
Pral3421g00021 564 Pfam Protein kinase domain 281 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00021 564 FunFam S-receptor-like serine/threonine-protein kinase 253 354 - -
Pral3421g00021 564 SMART serkin_6 278 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00021 564 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 355 554 - -
Pral3421g00021 564 Gene3D Phosphorylase Kinase; domain 1 257 354 - -
Pral3421g00021 564 ProSitePatterns Protein kinases ATP-binding region signature. 284 307 IPR017441 GO:0005524
Pral3421g00021 564 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 558 - -
Pral3421g00021 564 ProSiteProfiles Protein kinase domain profile. 278 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00021 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Pral3421g00021 564 Gene3D Transferase(Phosphotransferase) domain 1 355 554 - -
Pral3421g00021 564 CDD STKc_IRAK 284 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00021 Pral-Chr3421 320743 337889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00021 268 556 Receptor kinase-like Gene Family AT5G20050 41.748 8.74e-70 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3421g00021 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00021 - - pcin:129309635 799.275