Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00019 ATGGCAACCGTTGCTTCAAACGTCTACTTTCTTCTGTTACTATCTTTGCTCCGTGAAAGATTTGAAGCAGCATTTGCAAACCAAATAACCCTTGGGGCATCACTTTCCCCCACTATTCATCCTACTTCATGGCGTTCGTCTTCTGGTCGATTTGCGTTTGGGTTTTATCAGCAAGGCAATGGCTTCAAAGTTGGAATTTGGTTGTTTGGTGATGATGCTACTAATACAATCGTGTGGACCTCAAATCGTGATGAACCTCCAGTCTCCTCAAGTTCAAGGCTGTTTCTGACCAGGAACGGTGAGATTCTTCTACAGATAGGTCCAAGGCAAGAGAAGCGTATTGCTCACAGTGATAACGGAACTGTTCATTCTGCCTCCTTGCTTGATTCTGGCAACTTGGTGTTACAAGACAGAAGTTCCAATATCCTTTGGCAGAGTTTTGATTACCCAACGGATACAATTTTAGGAGGCCAAGTTCTACGAACTGGGGATAGATTGCTTTCTAGCTCATCAAACACCAACCAATCGTCAGGAAGGTTTCAGCTCAAAATGCAAGATGATGGAAACCTCGTTATGTATCCAGCCTATCCATCCACCACACCGTCGGATGCCTACTGGGCCACCATGACAGTGAATGGCGCAGGTTCCAAATTTTATCTTTCACTTGAAAATACATCTCCCTATCTGCGTATCTTAGATGCTAATCGTTCCAACACGGTCATATGGGAACCAAATGATACTGATTTGTCAACTTCAAGTAGCAACGGAAACAACACCATTTACCGTGCAGCCATTGATTACAATGGAGTTTTTCGAGTCTATGCTCATTTTGATGATAAGAATGGAAAACGCCAAGCTAGAAGTGTGTGGTCAGCTTTGGATGTATGCGATGTGAAGAATTTTTGTGGGTTCAATAGTTATTGTACATATATAGACGATAAACCCTTCTGTGATTGTCTTCCTGGAACTGATTATATAGATCAGAGTCAAAATAATCTTGGCTGCGTAAGGAACTTCTCAGATGTTGGGTGCAGAAATGGAGGAGATAATACAGATTTATATTCCATGTTTGGAATGAGTAGCATGTCTTGGAGTGATGCTCCTTACTTTGAAGAACCAATTCCAGAGGAGGACTGCCAATCTTCTTGTCTCAAAGATTGTTATTGTGGGGCTGCAATATACAAGGACGAGCGATGCGGGAAACAAAAGCTTCCATTAAGATATGTTAGAAGACAAACACAAGGATCCTCGTACACAATATACTTCAAGGTGGGAAAAGTAAGCCTCAAAAGCAACAGCACGTCTTCTTTTATACCTGAACCTCCAATAAAGACAACCAGTAAGAAAGCAATTCTGCTTATCACTCTTTTGATCTTAGGTTTTGCTATTCTTTTGTGTTCGGCTATTGCAATATCTGGCCATTTAATTTACAGAATTGGAATTTTAAGTTATAAGAGGTTGCTGGAGGTTGGAGATTTGGGCTTGAACGAAGGGATTACTCTCAGGTTATTTTCGTACAATGAATTGAAGAAAGCAACAAATGGCTTCAAGCAAGAGTTGGGTAAGGGTTCCTTTGGATCAGTTTATAAGGGAAGTTTAGACAAAGGAAGAAGATTGATTGCAGTGAAAAGACTAGAGAAGTTAGTTGAAGAAGGCGAGAGAGAATTCCAAGCTGAAATGCGAGCCATTGGGAAAACACACCACAAAAACTTAGTTCGCTTGCTGGGATATTGTGCTGAGGGATCTAAAAGGCTTTTAGTTTTTGAGTACATGAGCGGTGGTTCCCTTGAGAAGCTTATCTTTGGTGATAGTACTAGACGTCCAGATTGGGATCAAAGAAGAAGAATAGCACTGGACATTGCAAAAGGGCTATTGTATCTGCATGAAGAATGTGGAGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTCTGGACAGCTAAAATATCTGATTTTGGGCTAGCAAAACTTCTAATGCCGGATCAAACAAGAACCTTCACTGTTGTTAGAGGCACAAGAGGATACTTAGCTCCAGAATGGCAAAAAAATACTCCAATAACAGTGAAAACAGATGTTTATAGCTATGGAATCATGCTTTTGGAAATTCTATTTTGCAGAAGAAACATGGTGATTACCGTGTCACATCCAGAGCAAGTTGTTCTATCCACTTGGGTCTGCAATTGTTTTGTTAGGAGAGAGTTAAAGAAGCTTGTTATTGGGGAAGAAGTGGATAACACATTGCTTGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCCATGAAGAGTGTAGTGTTAATGCTTGAAGGAATTACTGATGTAGCTATCCCTCCTTGTCCATCTCCTGATTCCATGTGA 2400 0.4088 MATVASNVYFLLLLSLLRERFEAAFANQITLGASLSPTIHPTSWRSSSGRFAFGFYQQGNGFKVGIWLFGDDATNTIVWTSNRDEPPVSSSSRLFLTRNGEILLQIGPRQEKRIAHSDNGTVHSASLLDSGNLVLQDRSSNILWQSFDYPTDTILGGQVLRTGDRLLSSSSNTNQSSGRFQLKMQDDGNLVMYPAYPSTTPSDAYWATMTVNGAGSKFYLSLENTSPYLRILDANRSNTVIWEPNDTDLSTSSSNGNNTIYRAAIDYNGVFRVYAHFDDKNGKRQARSVWSALDVCDVKNFCGFNSYCTYIDDKPFCDCLPGTDYIDQSQNNLGCVRNFSDVGCRNGGDNTDLYSMFGMSSMSWSDAPYFEEPIPEEDCQSSCLKDCYCGAAIYKDERCGKQKLPLRYVRRQTQGSSYTIYFKVGKVSLKSNSTSSFIPEPPIKTTSKKAILLITLLILGFAILLCSAIAISGHLIYRIGILSYKRLLEVGDLGLNEGITLRLFSYNELKKATNGFKQELGKGSFGSVYKGSLDKGRRLIAVKRLEKLVEEGEREFQAEMRAIGKTHHKNLVRLLGYCAEGSKRLLVFEYMSGGSLEKLIFGDSTRRPDWDQRRRIALDIAKGLLYLHEECGAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTVVRGTRGYLAPEWQKNTPITVKTDVYSYGIMLLEILFCRRNMVITVSHPEQVVLSTWVCNCFVRRELKKLVIGEEVDNTLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGITDVAIPPCPSPDSM 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00019 799 Coils Coil 542 562 - -
Pral3421g00019 799 Gene3D - 151 294 - -
Pral3421g00019 799 ProSiteProfiles Bulb-type lectin domain profile. 151 286 IPR001480 -
Pral3421g00019 799 SMART serkin_6 514 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00019 799 SUPERFAMILY Protein kinase-like (PK-like) 499 783 IPR011009 -
Pral3421g00019 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 795 - -
Pral3421g00019 799 SMART blect_4 26 150 IPR001480 -
Pral3421g00019 799 Pfam D-mannose binding lectin 76 161 IPR001480 -
Pral3421g00019 799 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Pral3421g00019 799 CDD STKc_IRAK 520 785 - -
Pral3421g00019 799 FunFam Serine/threonine-protein kinase 150 286 - -
Pral3421g00019 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pral3421g00019 799 Gene3D Phosphorylase Kinase; domain 1 495 590 - -
Pral3421g00019 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 171 274 IPR036426 -
Pral3421g00019 799 ProSiteProfiles Protein kinase domain profile. 514 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00019 799 Pfam Protein kinase domain 517 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00019 799 PIRSF SRK 1 799 IPR024171 GO:0004674
Pral3421g00019 799 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral3421g00019 799 CDD B_lectin 46 150 IPR001480 -
Pral3421g00019 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 212 IPR036426 -
Pral3421g00019 799 FunFam S-receptor-like serine/threonine-protein kinase 491 590 - -
Pral3421g00019 799 Gene3D - 21 148 IPR036426 -
Pral3421g00019 799 Gene3D Transferase(Phosphotransferase) domain 1 591 790 - -
Pral3421g00019 799 FunFam Putative receptor-like protein kinase 591 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00019 Pral-Chr3421 307494 310179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00019 504 792 Receptor kinase-like Gene Family AT5G20050 43.269 1.56e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3421g00019 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00019 - - pcin:129309635 1009.98