Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00012 ATGCTATTACAGATTAAAAGAGAAATATCCATTATGAAAATTGTCAGGCATCCCAACATAGTCAGGTTGCATGAGGTTTTAGCTAGCCAGACTAAGATATACATAATTCTTGAGTTTGTCATGGGAGGAGAACTATATGACAAAATTGTTCAGCAGGTGAAACTTTCAGAAAATGAATCTAGGCGCTACTTTCAGCAACTCATAGATGCTGTTGCTCATTGTCACAGTAAGGGTGTGTACCATAGAGATTTAAAGCCTGAAAATCTGCTTCTTGATGCCTTTGGAAATCTGAAGGTTTCTGATTTTGGACTAAGTGCCTTGACTAAGCAGGGTGCTGGCCTCCTCCACACTACATGTGGAACCCCAAATTATGTTGCCCCAGAGGTTCTTAGCAATCTAGGTTATGATGGTGCAGCGGCTGATGTTTGGTCATGTGGAGTCATCCTATTCGTCCTTATGGCTGGATATCTTCCTTTTGAGGAGCCAAATCTACCGGCTCTGTTCAAAAGGCGCATCCGAATTGAAGAAATAAGAAAAGATCCGTGGTTCATTAAAAGTTATGTTCCCGTTAAAATTGGGAACGATGAGGAAGTGAATTTGGATGATGTTCAGGCTGTTTTTGATAACATTGAGGACAAGTATGTGGCTGAACGGTCAGAAAATACTGAGGTCGGTCCTTTGACAATGAATGCATTTGAGATGATAACTTTATCACAAGGATTGAATCTATCAGCCCTATTTGATAGGCGTCAGGACTACATAAAGAGGCAAACTCGTTTTGTATCTCGTAAGCCTGCGAAAGTTATAATTGCATCTGTTGAAGCTGTTGCAGAATCAATGGGCCTTAAGGTCCACTGTCGCAGTTACAAGATGAGACTTGAAGGCACATCTGCAAGGAACGCTGGACAATTTGCAGTGGTTTTGGAGGTCTATGAAGTTGCACCCTCACTTTTCATGGTAGACGTTCGAAAGGCTGCTGGGGATACTCTTGAATATCACAAGTTTTACAAGCACCTTTGTGAAAAACTATCAGACATTATTTGGAAACCAGCAGAGTCCATGCCAAATTCCGGTTTGCTTAGACAAGTGACTTGCTAA 1098 0.4144 MLLQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQVKLSENESRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGAGLLHTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILFVLMAGYLPFEEPNLPALFKRRIRIEEIRKDPWFIKSYVPVKIGNDEEVNLDDVQAVFDNIEDKYVAERSENTEVGPLTMNAFEMITLSQGLNLSALFDRRQDYIKRQTRFVSRKPAKVIIASVEAVAESMGLKVHCRSYKMRLEGTSARNAGQFAVVLEVYEVAPSLFMVDVRKAAGDTLEYHKFYKHLCEKLSDIIWKPAESMPNSGLLRQVTC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00012 365 CDD CIPK_C 230 345 - -
Pral3421g00012 365 Pfam NAF domain 226 285 IPR004041 GO:0007165
Pral3421g00012 365 Pfam Protein kinase domain 4 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00012 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Pral3421g00012 365 Gene3D Kinase associated domain 1, KA1 223 349 - -
Pral3421g00012 365 FunFam Non-specific serine/threonine protein kinase 223 349 - -
Pral3421g00012 365 FunFam Maternal embryonic leucine zipper kinase 1 196 - -
Pral3421g00012 365 SUPERFAMILY Protein kinase-like (PK-like) 3 184 IPR011009 -
Pral3421g00012 365 ProSiteProfiles NAF domain profile. 224 248 IPR018451 GO:0007165
Pral3421g00012 365 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 338 - -
Pral3421g00012 365 Gene3D Phosphorylase Kinase; domain 1 2 44 - -
Pral3421g00012 365 Gene3D Transferase(Phosphotransferase) domain 1 45 209 - -
Pral3421g00012 365 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00012 365 SMART serkin_6 4 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00012 Pral-Chr3421 147959 158303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00012 1 291 CBL-interacting serine-threonine protein kinases AT5G35410 65.732 6.09e-154 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral3421g00012 Pkinase 8.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00012 - - gmx:100811380 592.808