Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3421g00011 ATGAAGAAGGTGAGGAGAAAGGTTGGCAAGTATGAAGTGGGTCGTACCATCGGTGAAGGTACCTTTGCCAAAGTTAAATTTGCAAGAAACACAGAGACAGGGGAGAGTGTGGCTATTAAAGTAATGTCTAAGAGCACCATTCTCGAGCACAGAATGGTTGAACAGATTAAAAGAGAAATATCCATTATGAAAATTGTCAGGCATCCCAACATAGTCAGGTTGCATGAGGTTTTAGCTAGCCAGACTAAGATATACATAATTCTTGAGTTTGTCATGGGAGGAGAACTATATGACAAAATTGTTCAGCAGGTGAAACTTTCAGAAAATGAATCTAGGCGCTACTTTCAGCAACTCATAGATGCTGTTGCTCATTGTCACAGTAAGGGTGTGTACCATAGAGATTTAAAGCCTGAAAATCTGCTTCTTGATGCCTTTGGAAATCTGAAGGTTTCTGATTTTGGACTAAGTGCCTTGACTAAGCAGGGTGCTGGCCTCCTCCACACTACATGTGGAACCCCAAATTATGTTGCCCCAGAGGTTCTTAGCAATCTAGGTTATGATGGTGCAGCGGCTGATGTTTGGTCATGTGGAGTCATCCTATTCGTCCTTATGGCTGGATATCTTCCTTTTGAGGAGCCAAATCTACCGGCTCTGTTCAAAAGGCGCATCCGAATTGAAGAAATAAGAAAAGATCCGTGGTTCATTAAAAGTTATGTTCCCGTTAAAATTGGGAACGATGAGGAAGTGAATTTGGATGATGTTCAGGCTGTTTTTGATAACATTGAGGACAAGTATGTGGCTGAACGGTCAGAAAATACTGAGGTCGGTCCTTTGACAATGAATGCATTTGAGATGATAACTTTATCACAAGGATTGAATCTATCAGCCCTATTTGATAGGCGTCAGGACTACATAAAGAGGCAAACTCGTTTTGTATCTCGTAAGCCTGCGAAAGTTATAATTGCATCTGTTGAAGCTGTTGCAGAATCAATGGGCCTTAAGGTCCACTGTCGCAGTTACAAGATGAGACTTGAAGGCACATCTGCAAGGAACGCTGGACAATTTGCAGTGGTTTTGGAGGTCTATGAAGTTGCACCCTCACTTTTCATGGTAGACGTTCGAAAGGCTGCTGGGGATACTCTTGAATATCACAAGTTTTACAAGCACCTTTGTGAAAAACTATCAGACATTATTTGGAAACCAGCAGAGTCCATGCCAAATTCCGGTTTGCTTAGACAAGTGACTTGCTAA 1251 0.4189 MKKVRRKVGKYEVGRTIGEGTFAKVKFARNTETGESVAIKVMSKSTILEHRMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQVKLSENESRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGAGLLHTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILFVLMAGYLPFEEPNLPALFKRRIRIEEIRKDPWFIKSYVPVKIGNDEEVNLDDVQAVFDNIEDKYVAERSENTEVGPLTMNAFEMITLSQGLNLSALFDRRQDYIKRQTRFVSRKPAKVIIASVEAVAESMGLKVHCRSYKMRLEGTSARNAGQFAVVLEVYEVAPSLFMVDVRKAAGDTLEYHKFYKHLCEKLSDIIWKPAESMPNSGLLRQVTC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3421g00011 416 Pfam Protein kinase domain 11 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00011 416 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Pral3421g00011 416 CDD CIPK_C 281 396 - -
Pral3421g00011 416 Gene3D Kinase associated domain 1, KA1 274 400 - -
Pral3421g00011 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pral3421g00011 416 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Pral3421g00011 416 SUPERFAMILY Protein kinase-like (PK-like) 8 241 IPR011009 -
Pral3421g00011 416 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 389 - -
Pral3421g00011 416 Gene3D Transferase(Phosphotransferase) domain 1 91 259 - -
Pral3421g00011 416 Pfam NAF domain 277 336 IPR004041 GO:0007165
Pral3421g00011 416 FunFam Non-specific serine/threonine protein kinase 4 221 - -
Pral3421g00011 416 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pral3421g00011 416 FunFam Non-specific serine/threonine protein kinase 274 400 - -
Pral3421g00011 416 ProSiteProfiles NAF domain profile. 275 299 IPR018451 GO:0007165
Pral3421g00011 416 SMART serkin_6 11 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3421g00011 416 ProSiteProfiles Protein kinase domain profile. 11 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3421g00011 Pral-Chr3421 146201 158303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3421g00011 1 342 CBL-interacting serine-threonine protein kinases AT5G35410 67.742 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral3421g00011 Pkinase 9.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3421g00011 - - gmx:100811380 688.723