Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3417g00001 ATGTGGAACTCCGCCAAGAATGCCTTTGCCAGATCGGCGTCGTTTAGGGAGGACTTGGACGACGAGGAGGCGCTCCGGTGGGCCGCACTGGAGAGGCTGCCGACGTACTCGCGAGCACGCAGAGGCATTTTTAAGGATCTTACAGGTGAGAAAAAGGAGATCGATGTGAGCGAGCTCGAGGCACAGGAGCGGATTCTTGTTCTTGAGAGATTGGCTAATTCCGTTGGCGATGACCCAGAGAAGTTCTTCGATCAGATGAGAAGCCGATATGACAAGGTAAAGCTGAGGTTTCCGAAGATTCAAGTTCGATTTCAACAGTTGACAGTTGAAACCTATGTTCATGTTGGAAGCAGAGCCCTGCCGACGATTCCTAATTTTATCTACAATATGACCGAGGCTCTTTTAAGACAATTGCGACTATACAAGAGAAAGCGAAGTAAATTGACAATTCTAGCCGACATTAGTGGGATTATCAGACCCTCAAGATTGACTCTGCTGTTGGGCCCGCCAAGCTCTGGAAAAACGACACTACTTTTAGCTCTTGCTGGCAGGCTGGGGCCTGGTTTGCAGATGTCAGGGAGCATTACATACAATGGGCATACTCTCAATGAGTTTGTTCCTCAGAAAACAGCTGCTTATGTCAGCCAACAAGATTCACACGTGCCAGAGATGACTGTAAGGGAAACTCTTGATTTTGCTGGCCGCTGTCAAGGCGTTGGATTTAAGCATGATATGGTGCTGGAACTCGCCAGAAGAGAAAAGAATTCTGGGATAAAACCTGATGAAGATCTTGATATATTTATGAAGGCTTTAGCACTTGGTGAAAAGGAAACAAATCTTGTTGTGGAATACGTCATGAAGATATTAGGTTTGGACATGTGCGCTGACACATTGGTAGGAGATGAAATGCTGAAGGGCATTTCAGGAGGGCAAAAGAAGCGTCTTACAACAGGTGAATTACTGGTTGGGCCAGCAAGAGTCTTGTTCATGGATGAAATATCAACTGGCCTTGATAGTTCAACTACTTACCAAATTGTCAAATATCTTAAGCATTCCACCCGTGCGCTTGATACAACCACTATCATATCTCTTCTACAACCAGCTCCCGAGACATATGAGTTGTTTGATGATGTCATTCTTTTGTGCGAGGGTCAGATTGTGTATCAGGGACCTCGTGAGTCTACTCTTGAATTTTTCAGATTGATGGGATTTAGTTGTCCTGAGCGAAAGAATGTGGCAGACTTCTTGCAAGAAGTTACATCGAAGAAGGACCAAGAACAGTACTGGTCTGTTCTCGACCGTCCTTACCGGTACATACCCGTTGGGCAGTTTGCAGAAGCTTTTGCTTTATATCGCGATGGCAAGAATTTGTCAGAGGAACTAAAAGTTCCTTTCAATAAACGCTTTAATCACCCAGCAGCCTTGGCAACAACTAACTACGGAGCGAAAGGGCTTGAATTGCTCAAAACCAGCTACCAATGGCAGAGGCTACTAATGAAGCGAAATTCATTTATTTATGTCTTTAAATTTGTTCAGCTTCTTTTGGTTGCTTTGATCACAATGAGTGTTTTCTTCCGGACAACAATGCATAAAGACACAATAGACGATGGAGGCATATATCTGGGGGCGCTGTACTTTTCTATGGTAATTATTCTGTTCAATGGTTTTACGGAGGTATCAATGTTGGTTGCAAAGCTTCCAGTACTTTACAAGCACAGAGACTTGCACTTCTATCCTAGTTGGGTTTATACACTCCCTTCTTGGCTCCTTAGTGTTCCAACTTCCCTCATGGAGGCCGGATGCTGGGTTGTAGTCTCGTACTACACGATTGGATATGATCCTGCTATTTCTAGATTTTTAAAGCAGTTTTTGCTATATTTCCTTCTACACCAAATGTCAATTGGTCTCTTCCGTTTGATAGGATCGTTGGGCAGGAATATGATCGTAGCCAATACCTTCGGATCCTTTGCCATGTTGATTGTGATGGCCCTTGGAGGATACATAATTTCAAGAGACCGTATACCTCGTTGGTGGATATGGGGCTTTTGGATTTCTCCGCTAATGTATGGACAAAATTCGGCTTCTGCAAATGAGTTCCTTGGACATTCATGGCATAAGCCTGCTGGAAATGATACTTCACTTCCGTTGGGTAAAGCATTATTAAGAGAGCGGAGTTTGTATCCAGAGAGCTATTGGTATTGGATTGGTGTTGGTGCAATGGTTGGATATACGATTTTGTTCAATACATTATTTACTATCTTCCTAGCTTACCTTAATCCTTGGGGCAGGCCACAAGCTGTTGTCTCAAAGGAGGAGCTAGAAGAAAGAGAAAGGAGGAGAAGAGGCGAAAGTTCTGTTATTGAGCTGAGGGAGTACTTCCGGCATTCATCATCAAATGGAAAGCATTTTAAGCAACGAGGGATGGTTCTTCCTTTTCAACCGCTTTCAATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCCATGGAATTGAAACAACAAGGGATATCAGAAGACAGGTTGCAGCTGTTAGTTAATGTTACAGGAGCTTTTAGGCCTGGGGTGCTCACAGCATTGGTTGGAGTCAGTGGTGCTGGAAAAACCACTCTTATGGATGTATTGGCTGGAAGAAAAACTGGTGGAACCATAGAAGGGAGCATATGCATTTCTGGTTATCCAAAAAGACAAGAAACTTTTGCAAGAATTTCTGGATATTGTGAGCAGACTGATGTTCATTCTCCTTGCTTGACTGTCTGGGAATCACTACTATTCTCTGCTTGGCTTCGATTACCTTCAGATGTTAGCTTGGAGATACAAAAGGCTTTTGTTGAGGAGGTAATGGAGCTTGTGGAGCTCACTTCATTGAGTGGAGCACTTGTGGGTTTACCTGGAATTGATGGATTGTCAACAGAACAACGAAAAAGGTTAACTATAGCAATTGAACTGGTTGCCAACCCTTCTATAGTCTTTATGGATGAGCCCACATCAGGGTTGGACGCTCGGGCAGCTGCCATTGTGATGCGAACAGTGAGGAATATAGTAAATACTGGGAGAACTATTGTGTGCACAATCCATCAGCCTAGCATAGAAATATTTGAATCCTTTGATGAGCTTCTGTGTATGAAGCGGGGGGGTGAGCTAATATATGCTGGTCCGCTCGGCCCCAAGTCTTGTGAGCTAATAAGTTATTTTGAGTCGATTGAAGGTGTTCCAAAGATTAGAACAGGATATAACCCTTCTACATGGATGCTGGAGGTTACTTCTCCTTTGGAAGAAAGTCGTCTAGGAGTGGATTTTGCTGAAATCTACAGAAGATCAAGCTTATTTCTGCGAAACAAAGACTTGGTTGAAACCTTGAGCAAGCCCAGTAGTAATTCAAAAGAATTGAGTTTTCCTAGCAAGTATTGTCGGTCATATTTTGAGCAGTTCCTAACTTGCCTCTGGAAGCAAAATCTATCTTATTGGCGTAACCCACAATACACTGCTGTTCGCTTCTTCTACACTGTCATTATCTCATTGATGTTGGGAACTATATGCTGGAGATTTGGTGCCAAAAGGGAATCGCAGCAAGATATATTTAATGCCATGGGATCTATGTACGCAGCAATTCTATTTATTGGCATCACAAACGGCACGGCTGTTCAACCTGTTCTTTCTGTTGAAAGATTTGTTTCATATCGAGAAAGAGCAGCAGGGATGTATTCAGCCTTACCATTTGCATTTGCCCAGGGTGCTATTGAGTTTCCTTACGTATTTGCCCAATCTCTTATATACTGTTCAATATTCTATTCCATGGCTTGCTTTGAGTGGAGTGCTGTTAAGTTCATTTGGTACATATTCTTCATGTACTTTACCATGCTGTATTTTACCTTCTATGGAATGATGACCACGGCCGTCACACCAAATCATCATGTTGCTGCCATTATTGCTGCTCCATTTTATATGCTGTGGAATCTCTTCAGCGGTTTCATGATCCCTCATAAGAGAATTCCAATATGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGACTCTCTATGGCCTGGTAACTTCTCAGTATGGTGATGATTATAAACTTGTGAAGCTATCTGATGGAATAAGCTTGAGACCCATAAAGCAGGTTCTGGTTGAAGTGTTTGGTTATAAGCATGATTTCTTGTGCATTGCTGCCATAATGGTGCCTGGTTTCTGCATATTTTTTGCAATAATATTTGCCTTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 4260 0.4286 MWNSAKNAFARSASFREDLDDEEALRWAALERLPTYSRARRGIFKDLTGEKKEIDVSELEAQERILVLERLANSVGDDPEKFFDQMRSRYDKVKLRFPKIQVRFQQLTVETYVHVGSRALPTIPNFIYNMTEALLRQLRLYKRKRSKLTILADISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGSITYNGHTLNEFVPQKTAAYVSQQDSHVPEMTVRETLDFAGRCQGVGFKHDMVLELARREKNSGIKPDEDLDIFMKALALGEKETNLVVEYVMKILGLDMCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISTGLDSSTTYQIVKYLKHSTRALDTTTIISLLQPAPETYELFDDVILLCEGQIVYQGPRESTLEFFRLMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYIPVGQFAEAFALYRDGKNLSEELKVPFNKRFNHPAALATTNYGAKGLELLKTSYQWQRLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHKDTIDDGGIYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTLPSWLLSVPTSLMEAGCWVVVSYYTIGYDPAISRFLKQFLLYFLLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPRWWIWGFWISPLMYGQNSASANEFLGHSWHKPAGNDTSLPLGKALLRERSLYPESYWYWIGVGAMVGYTILFNTLFTIFLAYLNPWGRPQAVVSKEELEERERRRRGESSVIELREYFRHSSSNGKHFKQRGMVLPFQPLSMAFSNINYYVDVPMELKQQGISEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGSICISGYPKRQETFARISGYCEQTDVHSPCLTVWESLLFSAWLRLPSDVSLEIQKAFVEEVMELVELTSLSGALVGLPGIDGLSTEQRKRLTIAIELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIEIFESFDELLCMKRGGELIYAGPLGPKSCELISYFESIEGVPKIRTGYNPSTWMLEVTSPLEESRLGVDFAEIYRRSSLFLRNKDLVETLSKPSSNSKELSFPSKYCRSYFEQFLTCLWKQNLSYWRNPQYTAVRFFYTVIISLMLGTICWRFGAKRESQQDIFNAMGSMYAAILFIGITNGTAVQPVLSVERFVSYRERAAGMYSALPFAFAQGAIEFPYVFAQSLIYCSIFYSMACFEWSAVKFIWYIFFMYFTMLYFTFYGMMTTAVTPNHHVAAIIAAPFYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLVTSQYGDDYKLVKLSDGISLRPIKQVLVEVFGYKHDFLCIAAIMVPGFCIFFAIIFAFAIKSFNFQRR 1419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3417g00001 1419 Pfam ABC-transporter N-terminal 64 126 IPR029481 -
Pral3417g00001 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 835 1053 IPR027417 -
Pral3417g00001 1419 Gene3D - 830 1056 IPR027417 -
Pral3417g00001 1419 FunFam ABC transporter G family member 34 831 1063 - -
Pral3417g00001 1419 FunFam ABC transporter G family member 34 138 442 - -
Pral3417g00001 1419 Pfam ABC-2 type transporter 1142 1355 IPR013525 GO:0016020|GO:0140359
Pral3417g00001 1419 Pfam ABC-2 type transporter 488 699 IPR013525 GO:0016020|GO:0140359
Pral3417g00001 1419 CDD ABCG_PDR_domain2 814 1052 IPR034003 -
Pral3417g00001 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 817 1070 IPR003439 GO:0005524
Pral3417g00001 1419 Pfam ABC-2 type transporter 366 419 IPR043926 GO:0140359
Pral3417g00001 1419 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 4 1419 - -
Pral3417g00001 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 135 408 IPR003439 GO:0005524
Pral3417g00001 1419 SMART AAA_5 160 385 IPR003593 GO:0016887
Pral3417g00001 1419 SMART AAA_5 854 1046 IPR003593 GO:0016887
Pral3417g00001 1419 Pfam ABC transporter 846 997 IPR003439 GO:0005524
Pral3417g00001 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 408 IPR027417 -
Pral3417g00001 1419 Pfam Plant PDR ABC transporter associated 704 768 IPR013581 -
Pral3417g00001 1419 Pfam ABC transporter 152 333 IPR003439 GO:0005524
Pral3417g00001 1419 Gene3D - 135 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3417g00001 Pral-Chr3417 246365 257235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3417g00001 838 1029 Calmodulin-binding Proteins AT2G36910 26.020 2.17e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3417g00001 K08711 - gmx:100815410 2418.27