Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral340g00009 ATGACTACAAATTTGATTCCTAGACTTAATCTTGAATTTGATGATATAAAAGAATCATGGGAATTTTGGAATGCATATGGGAGAAGAACTGGCTTTGGTGTTCGAAAGCAGAAGTTTAACAAAACTAAAAATGATAAGTCAATATATTCTTCTTATCTATATGTTTGTAATAAAGAAGGGGTCAGAAAACCAAATAAACGAGATGTGCGAACTAGGAAGCCCAGAGATGAGACAAGAACAGGATGCGAAGCTAGAATGAAAGTTAAGCTGGTAGATGGAAAATACAAAATTATTGAAGTTGTTCTATATCATAATCATCCTCTTCAGCCCCCCAAAGCTGTTCATCTATTTGCATCACATCGAAGGATAACACCGGCTCAACAACATGAATTAGAAACTGCTGAAAAAGCTGGGATTAATCAAAAATTGGCATTCAATTTACAAAGCCAGTATGCAGGAGGTCAAGATAATTTGGGATATACAAGAGATGATGTTAAAAATTATCTTAACTCAAGAAGGCAACGAGCTATGAAATATGGTGATGCTGGATGTATATTTCGTTATTTTGAGCAACAATTGACAGAAAATCCATCCTTTTTCCATGCTTACCAAATGGACTCAGAGGAGCGAGTCACAAATGTGTTTTGGGCTGATGCACGCATGTTGATTGACTATGCTTGCTTTGGAGAAGTAATTTCACTTGATACAACTTATTGCACGAATAGTAATCACAGACCTCTTGCAATTTTCTTTGGCTTTAACCACTACAAAGCAGGGGTGATTTTTGGAGTGGCATTGTTATATGATGAGACCATCGAGACATTTAAATGGCTCTTCGAGACTTTTCTATGTGCACATAAGAATTTAAAGCCTTTAATAGTTTTCACTGACCAAGATGCTGCCATGGCATAA 912 0.3618 MTTNLIPRLNLEFDDIKESWEFWNAYGRRTGFGVRKQKFNKTKNDKSIYSSYLYVCNKEGVRKPNKRDVRTRKPRDETRTGCEARMKVKLVDGKYKIIEVVLYHNHPLQPPKAVHLFASHRRITPAQQHELETAEKAGINQKLAFNLQSQYAGGQDNLGYTRDDVKNYLNSRRQRAMKYGDAGCIFRYFEQQLTENPSFFHAYQMDSEERVTNVFWADARMLIDYACFGEVISLDTTYCTNSNHRPLAIFFGFNHYKAGVIFGVALLYDETIETFKWLFETFLCAHKNLKPLIVFTDQDAAMA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral340g00009 303 PANTHER OS01G0519700 PROTEIN 7 303 - -
Pral340g00009 303 Pfam FAR1 DNA-binding domain 21 110 IPR004330 -
Pral340g00009 303 Pfam MULE transposase domain 231 302 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral340g00009 Pral-Chr340 191868 192779 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral340g00009 FAR1 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral340g00009 - - pcin:129292420 423.32