Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3402g00003 ATGTTTTCCCAGAAAACCTTGATGATTAGATCATTCTCTTCTCTTCTTTTATTGCTTCTTCTGATTCTGCTAAGAAAATCTGCGGCTGATGCAGATGATGAGCAAAAGAAATTCTATATCGTTTTCTTAAGAGGGGATCCTGTTGATGGTATAAGCCCAGAAAATAGCTTACAGATTGAGAGTACTCATTTGAATGTTCTATCTTCTGTAAAAGAAAGCCACCATGAAGCAAAAGAATCGATGGTATATAGCTACTCAAAGAGTTTCAATGCCTTCGCTGCCAAATTATCTGATGATGAGGCCAGAAAGTTATCTGAAATGAAGGAAGTTGTTTCTGTGATTCCGAATCGATATCGTAAGCTACACACAACAAGATCATGGGACTTCATTGGCTTGCCTTTAACTGCTAAGAGAAGATTGAAACTAGAGAAAGATATCATTGTTGGTCTTCTGGATACAGGGACCACACCTGAATCAGATAGCTTCAAGGATGATGGGCTAGGTCCTCCACCAGCAAAATGGAAGGGATCTTGTGGTCATTTTGCCAATTTCTCCGGATGCAACAACAAGCTCATAGGAGCAAAGTACTTCAAGCTGGATGGAAACCCAGACGCGGAAGACATACTATCCCCCATTGATGTAGACGGCCATGGCACCCACACTTCTTCAACGGCGGCTGGCAACCTAGTCCGAAACGCGAGCTTATTCGGGCTGGCCCAAGGGACGGCTCGCGGGGCGGTGCCGTCGGCGAGAGTGGCGGTGTACAAGGTGTGTTGGGAGAGCAGTGGTTGTGCAGATATGGACATACTCGCAGCATTTGAAGCAGCAATTCATGATGGAGTGGATGTGATATCAATTTCCATCGGAGGAGGCGATCCGAGCTACGACAAAGATTCGATAGCGATCGGATCGTTTCATGCGATGAGCAAGGGGATAATCACTGTGGCTTCAGCTGGGAATGATGGCCCTTCTATGGCCACTGTTGTGAATACAGCTCCATGGCTTGTTACTGTGGGAGCTAGTGGCATTGATAGGCAATTCATCAGCACTGTGCAGTTGGGCAACGGACAGAATGTCTCTGGAAGAGGAGTGAACACTTTCAATCCAAAGCAAAAGCAATATCCTCTCATAAATGGAGCTGATGCAGCCCAAAACTCAGCAAGCAAGGAAGAAGCTAGATCCTGCTACGAAAGTGCCTTGGACCGAAAGAAGGTAAAGGGAAGGCTTGTTTACTGCGGACCAGATTCATCAGGTTCTGACTCTGTAATCAAAGAACTCGGAGGCATTGGTGCCATAATTGAAAATGAGCAATACCTTGACCTTGCTCAAATTTTCGTGGCTCCTGCTACAGCTGTCAATATCTCAGTTGGTCAATCCATCACCAATTACATAAAATCCACAAGATCACCATCAGCAGTGATATATAAGACCCATGAAGTGAAGAAGGCAGCTCCATTTGTTGCTTCGTTTTCTTCTAGGGGTCCAAATCCCGGTTCCATTCATGTTCTCAAGCCTGACCTTGCGGCCCCTGGGATTAACATATTGGCATCTTATACACTAAGAAGATCACTGACAGGTCAGCAAGGAGACACCCAATTTTCAAAATTTACGCTAATGTCTGGCACTTCCATGGCTTGCCCTCATGCTTCTGGAGTTGCTGCATATGTCAAATCTTTTCATCCAAACTGGTCTCCTGCTGCAATTAGATCTGCCATTATCACTACAGCCAAACCAATGAGCAAGAGGGTAAACAAGGAAGCAGAATTTGGTTACGGAGCAGGTCAAGTGAACCCAATGAGAGCCAAAAACCCTGGTTTAATCTACGACATGGACGCCTTCTCCTACCTCCAATTCCTCTGCCACGAAGGCTACAACGGCTCTGACCTCTCCGTCTTCACCGGCTCTCGTGTTAACTGCTCCTCCATCCTCCCCGGTCTCGGCCATGACGCCATTAACTACCCCACCTTCCAGCTTAGCTTGCAGACCAAGAAACCCTCCACACTTGCTGTGTTCCGAAGAACAGTCACCAACGTAGGACCTGGTCCTACCATGTTTAATGCCACTGTAAATGCTCCTTCAGGAGTGGAAGTCACTGTGAGCCCCATGAATCTTAGTTTCTCACGCACACTTCAAAAACGGAGCTTTAAAGTTGTGGTTAAGGCTAAGTCTATGGCTAGCATGAAGATTGTATCTGGTTCGCTTGTCTGGAAAAGTCCACGTTATGTTGTTAGGAGTCCTATTGTGGTTTATAGTCCATAA 2259 0.4599 MFSQKTLMIRSFSSLLLLLLLILLRKSAADADDEQKKFYIVFLRGDPVDGISPENSLQIESTHLNVLSSVKESHHEAKESMVYSYSKSFNAFAAKLSDDEARKLSEMKEVVSVIPNRYRKLHTTRSWDFIGLPLTAKRRLKLEKDIIVGLLDTGTTPESDSFKDDGLGPPPAKWKGSCGHFANFSGCNNKLIGAKYFKLDGNPDAEDILSPIDVDGHGTHTSSTAAGNLVRNASLFGLAQGTARGAVPSARVAVYKVCWESSGCADMDILAAFEAAIHDGVDVISISIGGGDPSYDKDSIAIGSFHAMSKGIITVASAGNDGPSMATVVNTAPWLVTVGASGIDRQFISTVQLGNGQNVSGRGVNTFNPKQKQYPLINGADAAQNSASKEEARSCYESALDRKKVKGRLVYCGPDSSGSDSVIKELGGIGAIIENEQYLDLAQIFVAPATAVNISVGQSITNYIKSTRSPSAVIYKTHEVKKAAPFVASFSSRGPNPGSIHVLKPDLAAPGINILASYTLRRSLTGQQGDTQFSKFTLMSGTSMACPHASGVAAYVKSFHPNWSPAAIRSAIITTAKPMSKRVNKEAEFGYGAGQVNPMRAKNPGLIYDMDAFSYLQFLCHEGYNGSDLSVFTGSRVNCSSILPGLGHDAINYPTFQLSLQTKKPSTLAVFRRTVTNVGPGPTMFNATVNAPSGVEVTVSPMNLSFSRTLQKRSFKVVVKAKSMASMKIVSGSLVWKSPRYVVRSPIVVYSP 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3402g00003 752 CDD Peptidases_S8_3 120 576 IPR034197 -
Pral3402g00003 752 Pfam Peptidase inhibitor I9 39 122 IPR010259 -
Pral3402g00003 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 74 749 IPR045051 -
Pral3402g00003 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Pral3402g00003 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 122 IPR037045 -
Pral3402g00003 752 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Pral3402g00003 752 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Pral3402g00003 752 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Pral3402g00003 752 CDD PA_subtilisin_like 350 474 - -
Pral3402g00003 752 Gene3D - 344 480 - -
Pral3402g00003 752 Pfam Fibronectin type-III domain 651 749 IPR041469 -
Pral3402g00003 752 ProSiteProfiles Serine proteases, subtilase domain profile. 126 602 - -
Pral3402g00003 752 Pfam Subtilase family 144 592 IPR000209 GO:0006508|GO:0008236
Pral3402g00003 752 SUPERFAMILY Subtilisin-like 121 606 IPR036852 GO:0004252|GO:0006508
Pral3402g00003 752 Gene3D - 619 751 - -
Pral3402g00003 752 FunFam Subtilisin-like protease SBT1.5 145 377 - -
Pral3402g00003 752 FunFam Subtilisin-like protease SBT5.3 27 122 - -
Pral3402g00003 752 Gene3D Peptidase S8/S53 domain 145 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3402g00003 Pral-Chr3402 66329 75187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3402g00003 29 588 Subtilisin-like Serine Gene Family AT4G00230 66.310 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3402g00003 - - ccaj:109800351 1099.73