Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3401g00002 ATGGATAATTCTGCGTCTTCATCACCACACCGGTACCCAAGCCCCTATGGATACCATAGTAGCCCTCCTCCTCCTTATCCACCTCCAGCTTCAGATCCAACGGCACCTCCTCCTTACCCTTATGCATTCAATCATTCACATTCCTTCAACCATCCCTATCCCCCACCTCCTGCACCATTTGATCATAGCCGTTACCCTCCACCACCAGACTATAGCCGGCCCCCTCCACCGCCGGATTATAGCTATACTAGTCCACCATCTGACTTTAATTATCCCCCTCCACCACCGTATTCTGCTCCTCTTCCTTATCCTTATCCATACCCCATTCCTTCAGGGATTCATAACACCCCTCAGCCTCCCCACCTTCATAGTTTTCAGTATGGATCATCTCATTATCCTCCCCAACAAACCGAGGCAGGTCCATATCCCCAGAGTCAATCTCTTTCCCATTCACGTGCAAATAGCTTCTCTGGTTCTCCCCAGCATGAGAGAATGAGTTCTGCTGGGGAAATATCGTTGCAAAGTAGTCATAGTTTCAGTCCTTCTAGGACTTCTGCATACCCACCTTTGGATGATCTTATGGGAAAAGTTAGCTTGTCTGATAGCCAGCCAACCGCTCCTGCATCACCCCCTGCACCTGTAGGGCAGCAACTGGCACATTCCGTTTCAGTTCCCCACCAAGATAAGAGAGAGGAATTTTATGGTTATCCCAATAACTCATTCTCTGGATGTGGATCTTCCTACTCTGGTCGGATCGATTCATCTAAACTGTCATCTTATTCAGGCTCATTTAATGATTCGAGGCATAGTCAGAGCTTGCAGATTGTTCCATCACGGAATAAAGGGTCATTGAAAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCTTGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTAGGGGATATGTTTGGTAAATTACCAGGAAATATGGGCAACAAAATTGAGGGAACTATGAGTAAGAAGATTACTAGTGATCCTTATGTAACAATTTCAGTATCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGTGAGAATCCTGTTTGGACTCAACATTTTCATGTTCCTGTTGCACATAATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTGGTAGGTTCACAGTTCATTGGCACTGTATCAATTCCTGTGGAACAAATATACTCAGGGGAAAGAATAGAAGGGACCTATCCCGTGCTGAATAATAATGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGCTTATCCATTCAGTACATCCCAATTGAGAGACTGAGCATTTATCACCAAGGCGTTGGAGCAGGACCAGAATACGCTGGAGTTCCTGGCACTTATTTTCCTTTAAGGAAAAGTGGAACTGTCACTCTATATCAAGATGCCCATGTTCCAGATGGCTGCCTCCCTAATGTCATACTTGACCAAGGGATGTATTATGCACATGGAAAATGTTGGAGAGACATTTTTGATGCCATACGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCAGTATGGCACAAAGTTCAGTTGGTAAGGGATGTTGGTAATCCATCAGGTTATGCACTGGGCGACCTTCTAAGGACCAAGTCACAGGAAGGAGTCAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCGAGGAACATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAAGAAATTCGACGATTTTTCAAACACTCTTCGGTTCAAGTGCTCCTTTGTCCACGCATTGCGGGAAAACGGCATAGCTGGGTGAAGCAAAGGGAAACCAGTACTATATATACGCATCACCAGAAAACTGTAATTGTTGATGCTGATGCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTATTTTTAGGACGCTCCAGACACTGCACAAGGATGACTATCATAACCCTACTTTCACGGGTAATGTTGGTGGTTGTCCACGGGAACCATGGCACGACTTGCATTCTAGAATTGATGGTCCAGCAGCATATGATGTTTTGACCAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGGATAAAAAAGCTGAGAAGTTCATATGACGATGCTTTGCTTAGGCTGGAAAGAATTCCGGACATTATTGGCATGTCTGATGCTCTTAGTGCTAAAGATAATGACCCTGAAACTTGGCATGTTCAGATATTTCGATCAATTGACTCAAATTCCGTAAAGGGATTTCCAAAGGATCCAAAAGATGCGACTAGCAAGAACTTAGTTTGTGGAAAGAATGTGTTGATCGACATGAGCATCCATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCACTGCATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCGCTAAAGATTGCTGAAAAGATCAGGGCCAACGAAAGGTTTGCTGTTTATATTGTTATTCCAATGTGGCCTGAGGGTGTTCCCACTGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGAGGCATTCTCACCAGAAGACTACTTGAACTTTTTCTGTCTTGGCAATCGCGAGGTCAATGACACATATGGTAGTGATGCAATGCCTGGAAATCCTCCTCCAGCAAACAGTCCACAGGCACTAAGTCAAAGTAGCCGACGTTTCATGATTTACGTTCATTCAAAAGGCATGATAGTTGATGACGAGTATGTGATATTGGGATCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCTATGGGAGCTTATCAACCTCATTATACCTGGGCAAGAAGACATTCTTATCCTCGTGGACAGATCCATGGATATAGGATGTCGCTCTGGGCAGAACACACAGGAACAATTGAAAACTGCTTCTTGCAACCGGAGGGCCTGGAATGCGTCAGAAGAGTAAGAGCAATGAGCGAAATGAACTGGAAACGATTTGCAGCACCAGAAGTAACGGAGATGAAAGGGCACCTACTGAAATACCCGGTAGAAGTTGATCGAAAGGGAAAGGTTAGATCCCTCCCTGGCCATGAAAATTTCCCAGATGTTGGTGGCAAAATAACGGGGTCATTTCTAGCCATTCAGGAGAATCTTACCATTTGA 3318 0.4376 MDNSASSSPHRYPSPYGYHSSPPPPYPPPASDPTAPPPYPYAFNHSHSFNHPYPPPPAPFDHSRYPPPPDYSRPPPPPDYSYTSPPSDFNYPPPPPYSAPLPYPYPYPIPSGIHNTPQPPHLHSFQYGSSHYPPQQTEAGPYPQSQSLSHSRANSFSGSPQHERMSSAGEISLQSSHSFSPSRTSAYPPLDDLMGKVSLSDSQPTAPASPPAPVGQQLAHSVSVPHQDKREEFYGYPNNSFSGCGSSYSGRIDSSKLSSYSGSFNDSRHSQSLQIVPSRNKGSLKVLLLHGNLDIWVLEAKNLPNMDMFHKTLGDMFGKLPGNMGNKIEGTMSKKITSDPYVTISVSNAVIARTFVISNSENPVWTQHFHVPVAHNAAEVHFVVKDSDVVGSQFIGTVSIPVEQIYSGERIEGTYPVLNNNGKPCKPGAVLSLSIQYIPIERLSIYHQGVGAGPEYAGVPGTYFPLRKSGTVTLYQDAHVPDGCLPNVILDQGMYYAHGKCWRDIFDAIRQARRLIYITGWSVWHKVQLVRDVGNPSGYALGDLLRTKSQEGVRVLLLIWDDPTSRNILGYKTDGVMATHDEEIRRFFKHSSVQVLLCPRIAGKRHSWVKQRETSTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPIFRTLQTLHKDDYHNPTFTGNVGGCPREPWHDLHSRIDGPAAYDVLTNFEERWLKASKPHGIKKLRSSYDDALLRLERIPDIIGMSDALSAKDNDPETWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHCIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVNDTYGSDAMPGNPPPANSPQALSQSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARRHSYPRGQIHGYRMSLWAEHTGTIENCFLQPEGLECVRRVRAMSEMNWKRFAAPEVTEMKGHLLKYPVEVDRKGKVRSLPGHENFPDVGGKITGSFLAIQENLTI 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3401g00002 1105 SUPERFAMILY Phospholipase D/nuclease 750 1036 - -
Pral3401g00002 1105 Pfam Phospholipase D Active site motif 952 978 IPR001736 GO:0003824
Pral3401g00002 1105 Pfam Phospholipase D Active site motif 617 651 IPR001736 GO:0003824
Pral3401g00002 1105 MobiDBLite consensus disorder prediction 107 224 - -
Pral3401g00002 1105 Pfam C2 domain 291 417 IPR000008 -
Pral3401g00002 1105 ProSiteProfiles C2 domain profile. 269 415 IPR000008 -
Pral3401g00002 1105 MobiDBLite consensus disorder prediction 50 95 - -
Pral3401g00002 1105 FunFam Phospholipase D delta 492 730 - -
Pral3401g00002 1105 MobiDBLite consensus disorder prediction 16 40 - -
Pral3401g00002 1105 PANTHER PHOSPHOLIPASE D 281 1096 IPR015679 -
Pral3401g00002 1105 CDD C2_plant_PLD 285 438 - -
Pral3401g00002 1105 SMART C2_3c 292 414 IPR000008 -
Pral3401g00002 1105 FunFam Phospholipase D 764 997 - -
Pral3401g00002 1105 FunFam Phospholipase D delta 286 433 - -
Pral3401g00002 1105 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 616 651 IPR001736 GO:0003824
Pral3401g00002 1105 Gene3D Endonuclease Chain A 492 730 - -
Pral3401g00002 1105 MobiDBLite consensus disorder prediction 117 185 - -
Pral3401g00002 1105 Gene3D Endonuclease Chain A 760 1004 - -
Pral3401g00002 1105 MobiDBLite consensus disorder prediction 1 95 - -
Pral3401g00002 1105 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 289 440 IPR035892 -
Pral3401g00002 1105 SMART pld_4 951 978 IPR001736 GO:0003824
Pral3401g00002 1105 SMART pld_4 616 651 IPR001736 GO:0003824
Pral3401g00002 1105 Gene3D C2 domain 286 425 IPR035892 -
Pral3401g00002 1105 SUPERFAMILY Phospholipase D/nuclease 495 716 - -
Pral3401g00002 1105 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 951 978 IPR001736 GO:0003824
Pral3401g00002 1105 Pfam Phospholipase D C terminal 1025 1095 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3401g00002 Pral-Chr3401 8359 22726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3401g00002 77 1105 Phospholipase D Gene Family (Wang group) AT2G42010 69.934 0.0 1473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3401g00002 K01115 - gmx:100791059 1685.23