Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3400g00004 ATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGAGGCATTCTCACCAGAAGACTACTTGAACTTTTTCTGTCTTGGCAATCGCGAGGTCAATGACACATATGGTAGTGATGCAATGCCTGGAAATCCTCCTCCAGCAAACAGTCCACAGGCACTAAGTCAAAGTAGCCGACGTTTCATGATTTACGTTCATTCAAAAGGCATGATAGTTGATGACGAGTATGTGATATTGGGATCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCTATGGGAGCTTATCAACCTCATTATACCTGGGCAAGAAGACATTCTTATCCTCGTGGACAGATCCATGGATATAGGATGTCGCTCTGGGCAGAACACACAGGAACAATTGAAAACTGCTTCTTGCAACCGGAGGGCCTGGAATGCGTCAGAAGAGTAAGAGCAATGAGCGAAATGAACTGGAAACGATTTGCAGCACCAGAAGTAACGGAGATGAAAGGGCACCTACTGAAATACCCGGTAGAAGTTGATCGAAAGGGAAAGGTTAGATCCCTCCCTGGCCATGAAATTTCCCAGATGTTGGTGGCAAAATAA 621 0.4525 MQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVNDTYGSDAMPGNPPPANSPQALSQSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARRHSYPRGQIHGYRMSLWAEHTGTIENCFLQPEGLECVRRVRAMSEMNWKRFAAPEVTEMKGHLLKYPVEVDRKGKVRSLPGHEISQMLVAK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3400g00004 206 SUPERFAMILY Phospholipase D/nuclease 56 151 - -
Pral3400g00004 206 SMART pld_4 66 93 IPR001736 GO:0003824
Pral3400g00004 206 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 66 93 IPR001736 GO:0003824
Pral3400g00004 206 PANTHER PHOSPHOLIPASE D 1 195 IPR015679 -
Pral3400g00004 206 Pfam Phospholipase D C terminal 140 198 IPR024632 -
Pral3400g00004 206 Pfam Phospholipase D Active site motif 67 93 IPR001736 GO:0003824
Pral3400g00004 206 Gene3D Endonuclease Chain A 25 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3400g00004 Pral-Chr3400 62613 65057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3400g00004 1 198 Phospholipase D Gene Family (Wang group) AT2G42010 66.816 1.94e-99 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3400g00004 K01115 - lja:Lj0g3v0363499.1 355.525